Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g70208.01.t

Possible name(s)

SLC18A2; SLC18A3; SLC18B1

Gene model

Boschl.CG.Botznik2013.chr5.g70208

Location

chr5 [643,082 / 646,467]

Sequences

Amino acid sequence

Length: 368

>Boschl.CG.Botznik2013.chr5.g70208.01.p
MMQEYDSSGDSKLSQSYQCSNQYEDCDRSNLNITDRNMDYSTFKDFSCNANRVRNHSASL
PYIPHAHHSTVGPASSLRSIASLEWVSSNRNDQNANNNSFLEESENALPSEGDKRPSDRF
WGFSIRQLKCGVALSLLSTVDVMGFSIFSPFFPVVAEKKEMSEFQIGLVFATFSIAGILA
SIFTGTLLVRLGAKFIILCGLFWSAGATICFGLLDRVPNDYFFWLCLACRVFMGVGSLSA
FTAMFAVIFQEFQDRALTVIGITESLCSIGGIVGPLIGGGLYDLGGYVLPFAFLGGIQIL
VLVACAVLIPHSAVERHASAVSPAWLLLNAHGLFSAVFVVMSFAVNAFITANLSLFLMHS
VSILQCIT

Nucleotide sequence

Length: 1,107

>Boschl.CG.Botznik2013.chr5.g70208.01.t
TATGATGCAAGAATACGATTCGTCGGGTGATTCAAAATTGAGCCAATCGTATCAATGCTC
CAATCAATATGAAGATTGTGATCGATCAAATCTGAATATAACCGATCGAAACATGGACTA
TAGCACATTCAAGGATTTCTCCTGTAATGCAAACCGCGTCCGAAATCATTCGGCGTCGCT
GCCTTACATTCCGCACGCCCATCACAGTACCGTTGGTCCCGCTTCATCCCTTCGTTCAAT
TGCATCGCTGGAATGGGTGTCATCGAATAGAAATGATCAGAATGCAAACAACAATTCTTT
TCTTGAAGAATCTGAAAATGCACTTCCATCAGAAGGGGACAAGCGACCAAGTGACAGATT
TTGGGGCTTTAGTATACGGCAATTGAAATGCGGTGTAGCCTTGTCTTTACTCTCAACTGT
GGATGTGATGGGCTTTTCAATATTTTCACCGTTTTTCCCAGTGGTGGCAGAGAAAAAAGA
AATGTCAGAATTTCAGATTGGCTTGGTTTTTGCAACATTTTCGATAGCAGGCATTTTGGC
GTCCATCTTTACTGGCACTTTGTTGGTTCGCTTGGGAGCAAAATTCATCATTCTGTGCGG
TTTGTTTTGGTCTGCTGGGGCTACCATCTGTTTTGGATTGTTAGACCGTGTTCCGAATGA
CTACTTCTTCTGGCTATGCCTCGCCTGTCGAGTCTTTATGGGTGTGGGAAGCCTGTCAGC
GTTCACTGCTATGTTCGCGGTTATTTTTCAAGAGTTCCAGGACCGTGCCCTCACCGTGAT
CGGGATAACCGAATCACTCTGTTCAATTGGCGGTATCGTTGGACCGTTGATTGGCGGTGG
ATTGTACGAGCTTGGCGGATACGTGCTTCCTTTCGCCTTTCTCGGTGGCATACAGATACT
GGTGCTGGTGGCATGCGCTGTTCTGATACCTCATTCTGCAGTTGAGCGGCATGCAAGCGC
CGTGAGCCCGGCGTGGCTGTTGTTGAACGCACACGGCTTATTTTCTGCAGTGTTTGTCGT
CATGTCTTTCGCCGTGAACGCTTTCATCACTGCCAACTTATCATTGTTTCTGATGCATTC
GGTTAGTATATTACAATGTATTACTTG

InterProScan

SUPERFAMILY	MFS_trans_sf (IPR036259) - T[109-359] 1.83E-32
ProSiteProfiles	MFS_dom (IPR020846) - T[130-368] 13.632
CDD	MFS_dom (IPR020846) - T[132-311] 1.24682E-15
Pfam	MFS (IPR011701) - T[135-358] 2.7E-23

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
S18B1_HUMAN	34.667 %	117	2.23E-29