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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g69378.01.t

Possible name(s)

RHOA; RHOB; RHOC

Gene model

Boschl.CG.Botznik2013.chr5.g69378

Location

chr5 [1,483,362 / 1,488,997]

Sequences

Amino acid sequence

Length: 193

>Boschl.CG.Botznik2013.chr5.g69378.01.p
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKTVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRQDQGTIQELSKMKQEPVRFEEGRAMAEKIGAYSYLECSSKTKDGVREVFETATRAALQ
TRKHKKRGGCDVL

Nucleotide sequence

Length: 582

>Boschl.CG.Botznik2013.chr5.g69378.01.t
TGGCTGCTATTAGAAAAAAACTGGTCATCGTAGGAGATGGTGCCTGTGGTAAGACCTGTC
TTCTGATCGTCTTCAGTAAAGATCAATTCCCGGAAGTGTATGTACCTACTGTTTTTGAGA
ACTACGTTGCTGACATTGAAGTGGATGGAAAAACGGTTGAACTTGCCTTGTGGGACACCG
CCGGTCAGGAAGATTACGATCGTCTGCGACCCCTTTCCTATCCGGACACCGATGTGATTT
TGATGTGCTTTTCTATAGACAGTCCCGATTCGTTGGAGAACATTCCTGAAAAATGGACAC
CAGAGGTGAAACATTTCTGTCCGAATGTTCCGATTATATTGGTTGGAAATAAGAAAGATT
TGCGGCAAGATCAAGGGACGATACAAGAGCTTAGTAAGATGAAGCAAGAGCCGGTAAGGT
TCGAAGAAGGCCGCGCGATGGCAGAAAAAATCGGTGCATATAGGTACCTTGAATGCTCCT
CTAAGACCAAGGACGGGGTGCGGGAGGTTTTCGAGACGGCGACCCGCGCCGCGCTTCAAA
CGAGAAAGCACAAGAAGAGAGGCGGCTGCGACGTGCTATAAA

InterProScan

ProSiteProfiles
Small_GTPase_Rho (IPR003578) - T[1-178] 27.904
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[5-159] 5.3E-44
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[6-179] 4.53E-59
Pfam
Small_GTPase (IPR001806) - T[7-179] 5.9E-58

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RHOA_HUMAN 88.083 % 354 9.11E-127
RHOB_HUMAN 84.211 % 334 9.53E-119
RHOC_HUMAN 87.565 % 355 4.18E-127