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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA107YC20' > 
  2. Clone 'BW571151' > 
  3. Clone 'cien31234' > 
  4. Clone 'cima049d07' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g69243.01.t

Possible name(s)

ATG2A; ATG2B

Gene model

Boschl.CG.Botznik2013.chr5.g69243

Location

chr5 [3,050,764 / 3,054,331]

Sequences

Amino acid sequence

Length: 1,188

>Boschl.CG.Botznik2013.chr5.g69243.01.p
MSSLTDDKDSVSDLDYPLIRIKFNPAQDIGHNVLEDIDCDKDGGDSPAKSEFDKVWFDQV
IDFSVDDDRTDAEVSPFSQKKVMYNDKEVILPGDANELSEFSEHCVSRSRAAISIQLPAV
NMFLESHSFFENLYNRINNDILLWTPAAPAMQLPTQSSDAKSTLMLGSCHPLYKNGLDVA
SHLLKDRDDDTLSYESDSDDSIGYRMPSLHGGSPRRRIGSKEQCLVSIVTKIGYGKVVTK
CIVSDESESNHGEVLLMLENANVFYVVSYCGDPNLDYVCVQIGEFDLFHKSSVPSRDILS
NIGPYTANQPSHLDKVLTQCPGEISRVFTRPVTNDGGRHMLDLVIKIKTDEKCARHFLIA
TCLNEVLLAHRFSKSGQNWFEQIMQFFDAADDQVLGYEPPPYITEIHLNVANSAIQYKPI
YMSPAVNSVLTLSSFSFSSNIVSSAPKSVFHMMLDDAKFYISPVSGLSYFNQDYICVLEV
NVLELVLQLLGDFEDISEHPAVELNISNNLVTIRTCTDSCVLLCSLIKHIAAGGDFGQEI
VNSDDSTTCNIPARRPSDAMDDNQNENIMNLIADAMLDDDGNTNQDAAESNFEKRPHAFG
NADIMAQSMFVLPNSKQTGDFGGRNLRHMTSSVNSLPLKTSNFINDDDFCIIGEEMLDSS
CDSEPVINYLFPRDKTDIQTDVLIVENHFEPSYGKIDQLQAPKHFPTPVSLYSLNELSVI
WCMYGGRDFDDVKSGTSSSPGKARYRGQNTRQGSNRDSTMMMEFQLSKISARYEEYPDVT
YEAKRLVLVINELEVRDKLRTSQINKFLYRFHSEESPRQTHAKAVLIKILQIRPEGLDAP
ENKLRVSLQPLRLNVDQDTLYFVSNYFAEIQEGLSGSFENASEVRDTNSSPAFDKNPQTT
TKSSNQSPSHSKPYEPIYFRELIFSPAVPIRLDYHGKRIDTEQGAISGLLIGIVRLNGSQ
LRLKRIVRKQGLLGVERLVSFLINEWATDIKANQFPSILGGVGPLYSVGQFFGGIRDFFY
LPIDQYRKDGRIVRGIQRGVTSFGTSTAMSTLELANSAAGAVHYAAETTRELISPAHPRD
LNDPNWRSSAKPRLNQPADIREGVSNAYTVLKQGLEEGTSSLVQMAQKEHEMKGTTAAVG
VVLRHIPLAVVKPLVMGTEAASNLLSGVRNQIRPDAKQQDEDKWKNND

Nucleotide sequence

Length: 3,567

>Boschl.CG.Botznik2013.chr5.g69243.01.t
GATGTCCTCCCTGACAGACGATAAAGATAGTGTCAGCGACTTAGACTATCCCTTGATCCG
AATCAAATTCAACCCAGCTCAAGACATCGGTCATAACGTACTGGAGGATATCGATTGTGA
TAAGGACGGTGGAGACAGCCCGGCCAAGTCAGAGTTTGATAAAGTATGGTTCGATCAAGT
AATCGATTTCTCTGTCGACGATGACCGAACTGACGCCGAGGTGTCACCTTTTTCTCAGAA
GAAAGTCATGTACAACGATAAGGAAGTGATATTACCCGGGGACGCGAACGAATTATCTGA
ATTTTCCGAACACTGCGTTTCGCGTTCTCGCGCAGCCATTTCAATCCAACTGCCCGCCGT
GAATATGTTTCTGGAATCGCACTCGTTCTTCGAAAACCTTTACAACCGCATCAACAATGA
TATCTTGCTTTGGACTCCGGCGGCTCCCGCTATGCAGTTACCCACTCAATCTTCGGACGC
AAAGTCCACGCTTATGCTTGGCAGTTGCCATCCGCTTTACAAAAACGGGCTTGATGTCGC
CAGTCATTTGTTAAAAGACCGCGACGATGATACACTTTCGTATGAATCAGATTCGGATGA
TTCCATCGGATACAGGATGCCTTCACTGCATGGCGGGTCACCTCGGAGAAGAATCGGTTC
GAAAGAACAGTGTCTCGTTTCTATCGTGACAAAGATAGGATACGGCAAAGTCGTAACAAA
GTGCATCGTTTCGGATGAATCCGAGTCTAACCACGGAGAAGTTTTGCTGATGTTGGAAAA
CGCAAATGTTTTCTACGTCGTGAGTTATTGCGGCGATCCCAATTTGGATTACGTCTGTGT
TCAAATCGGAGAATTTGACTTGTTCCACAAATCGTCTGTTCCGTCACGTGACATTCTATC
TAACATCGGTCCGTACACTGCAAACCAACCGTCACATCTCGACAAGGTTTTAACACAATG
TCCCGGAGAGATTTCAAGAGTGTTCACGAGGCCGGTGACTAATGACGGCGGCCGGCATAT
GCTTGACCTCGTCATTAAAATCAAAACCGATGAGAAATGCGCCAGACATTTTTTGATAGC
GACTTGCCTCAACGAAGTCTTGCTTGCCCACAGGTTCTCTAAATCCGGACAAAATTGGTT
CGAACAAATCATGCAATTCTTTGACGCTGCTGACGATCAGGTTTTGGGTTACGAACCACC
TCCTTATATCACAGAGATTCATTTGAACGTCGCAAATTCGGCGATTCAGTACAAACCGAT
ATACATGTCGCCTGCTGTGAATTCAGTGCTGACGCTGAGTTCATTTTCTTTTTCGTCAAA
TATCGTGTCAAGCGCACCAAAATCCGTGTTTCACATGATGCTAGACGATGCGAAGTTTTA
TATCTCCCCCGTATCGGGCCTTTCTTATTTCAATCAGGATTACATCTGCGTTTTGGAGGT
AAATGTTTTGGAGTTGGTATTGCAGCTGTTGGGTGACTTTGAAGATATCTCCGAGCACCC
TGCCGTTGAATTGAATATTTCTAACAACTTGGTGACCATTCGCACTTGTACGGATTCGTG
CGTACTGCTTTGTTCTTTGATCAAACACATCGCTGCAGGCGGTGATTTTGGCCAAGAAAT
CGTAAACTCTGATGACTCGACTACCTGCAACATCCCGGCCAGGCGCCCGTCAGATGCAAT
GGACGATAATCAGAACGAAAACATCATGAATCTGATCGCAGATGCAATGTTGGATGATGA
TGGAAACACCAATCAAGACGCTGCGGAATCCAATTTCGAAAAAAGGCCGCACGCTTTCGG
TAACGCTGACATCATGGCGCAATCCATGTTTGTTTTGCCCAATTCGAAACAGACCGGTGA
CTTTGGAGGTCGAAATTTGCGGCACATGACTTCTTCCGTCAATTCCCTCCCTTTAAAAAC
ATCCAATTTTATAAACGACGATGATTTCTGCATTATCGGCGAAGAGATGTTAGATTCGAG
CTGCGATAGCGAGCCTGTCATCAATTATCTTTTCCCGAGAGACAAAACCGATATTCAGAC
TGACGTCCTGATTGTTGAGAATCACTTCGAACCGTCTTACGGCAAGATCGATCAGCTTCA
AGCACCCAAACACTTCCCCACTCCGGTATCCCTGTACTCTTTAAACGAGCTGTCGGTTAT
CTGGTGCATGTACGGCGGCAGAGATTTCGACGATGTTAAGTCTGGAACTTCTTCATCTCC
GGGCAAAGCGAGATATCGCGGTCAAAACACGAGGCAGGGTTCAAATCGCGATTCTACCAT
GATGATGGAGTTTCAGTTGTCGAAAATCAGCGCCAGGTACGAGGAGTATCCTGATGTGAC
TTACGAGGCGAAAAGGCTTGTGCTGGTGATCAACGAGTTGGAGGTGCGCGATAAATTACG
GACGTCTCAGATCAATAAGTTTCTGTACCGATTTCACAGCGAAGAAAGCCCGCGGCAAAC
CCACGCTAAAGCCGTCCTGATCAAAATACTGCAGATACGCCCGGAAGGCTTGGACGCGCC
GGAGAATAAGCTACGGGTTTCGTTACAGCCTCTCCGGCTTAATGTGGATCAAGACACGCT
GTACTTTGTGAGCAACTACTTTGCTGAGATTCAAGAGGGATTGTCTGGCAGTTTTGAAAA
CGCGTCTGAGGTCAGAGACACTAACTCATCGCCGGCGTTCGATAAAAATCCGCAAACCAC
GACCAAATCATCGAACCAATCTCCGAGCCATTCGAAACCTTACGAGCCAATATATTTCCG
AGAGCTGATCTTTTCGCCTGCAGTACCAATACGCTTGGACTATCACGGAAAGCGTATCGA
CACAGAGCAAGGCGCAATTTCCGGCTTACTTATAGGTATAGTACGGCTAAACGGGTCGCA
ATTACGGCTAAAAAGAATCGTTCGAAAGCAAGGACTCTTGGGTGTCGAGAGGCTTGTGTC
TTTTCTGATTAACGAGTGGGCCACTGACATCAAAGCCAATCAGTTTCCTTCCATTCTAGG
AGGAGTAGGGCCTCTGTATTCGGTCGGGCAATTTTTCGGAGGAATCCGAGATTTTTTCTA
TTTGCCCATCGATCAATACCGCAAAGACGGCCGTATAGTACGTGGTATACAACGTGGCGT
GACTTCGTTTGGCACGTCCACAGCCATGTCTACCTTAGAATTGGCCAACAGCGCCGCCGG
GGCCGTTCATTACGCGGCAGAGACCACGCGTGAATTGATATCGCCGGCTCACCCGCGTGA
CCTGAATGATCCAAACTGGCGTTCCTCGGCTAAACCTCGTCTAAACCAGCCTGCTGATAT
ACGAGAAGGCGTCAGCAACGCCTATACGGTTTTAAAACAAGGTCTGGAGGAAGGAACATC
GTCGCTGGTGCAGATGGCACAGAAAGAACATGAAATGAAAGGTACCACTGCGGCTGTCGG
AGTCGTGCTACGGCATATTCCACTTGCTGTTGTAAAGCCGTTGGTTATGGGGACGGAGGC
AGCGTCGAATTTGCTGAGCGGTGTTAGGAACCAAATCAGGCCTGATGCGAAACAGCAAGA
CGAAGATAAATGGAAGAACAACGATTG

InterProScan

PANTHER
ATG2 (IPR026849) - T[70-1187] 6.4E-251
Pfam
ATG2_CAD_motif (IPR026885) - T[410-531] 5.9E-5
Pfam
Autophagy-rel_C (IPR015412) - T[1093-1185] 5.8E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATG2B_HUMAN 33.825 % 669 0
ATG2A_HUMAN 35.406 % 685 0