- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g66960.01.t
Possible name(s)
CLEC18A; CLEC18C; GLIPR2
Gene model
Location
chr5 [3,407,564 / 3,415,996]
Amino acid sequence
Length: 232
>Boschl.CG.Botznik2013.chr5.g66960.01.p
MSEPGKTIETKVEYVDEDGQKKRKTTKTTTIVRETKSGSLQTKTATEIRTEHLPGDYSGT
EETTINIEKLKITDDSDDEEHDGKNAMNLGDTQDFREDCINAINKFRKKHSVKKLKMSGN
LTAKAQDHAVKMLKKNCLSTLKGAYGQSLSMKMPRPKGKEVAQLWYKEGEDYDYSKNEFV
KGKGNFTQIVWADSTEIGVGIASNQAGVTFSIALFTPPGNVQGQFTDNVKKC
Nucleotide sequence
Length: 699
>Boschl.CG.Botznik2013.chr5.g66960.01.t
CATGTCGGAGCCAGGAAAAACTATCGAAACCAAGGTGGAGTACGTCGACGAAGATGGACA
AAAGAAAAGGAAAACAACCAAAACAACCACGATAGTGCGAGAAACGAAATCCGGAAGCTT
GCAAACGAAGACTGCAACCGAAATTCGCACGGAGCACCTGCCCGGGGATTATTCAGGCAC
AGAAGAAGCCACTATAAATATCGAAAAACTGAAAATCACCGACGATAGCGACGACGAAGA
GCACGACGGGAAAAACGCAATGAACCTCGGCGACACGCAGGATTTCAGAGAGGATTGCAT
CAACGCTATCAACAAATTCAGAAAGAAGCACTCGGTCAAGAGACTCAAAATGTCCGGCAA
CCTGACCGCGAAAGCCCAAGACCACGCTGTGAAGATGTTAAAGAAAAATTGTCTCAGCAC
CCTCAAGGGAGCGTACGGACAATCGCTTTCCATGAAAATGCCGCGCCCGAAAGGTAAAGA
GGTGGCGCAATTGTGGTATAAAGAGGGAGAGGACTACGATTACTCCAAGAACGAATTTGT
GAAAGGAAAAGGAAATTTCACTCAAATCGTTTGGGCGGACAGTACCGAAATCGGCGTGGG
CATCGCTTCGAATCAAGCCGGCGTCACATTCTCCATAGCACTCTTCACTCCGCCGGGCAA
CGTGCAGGGTCAATTCACAGATAACGTGAAAAAATGCTG
| PANTHER |
Allrgn_V5/Tpx1 (IPR001283) - T[20-230] 1.6E-36 |
| Gene3D |
CAP_sf (IPR035940) - T[89-232] 1.4E-33 |
| SUPERFAMILY |
CAP_sf (IPR035940) - T[91-225] 1.83E-31 |
| CDD |
SCP_GAPR1-like (IPR034113) - T[94-221] 5.3479E-47 |
| SMART |
CAP_domain (IPR014044) - T[94-223] 1.2E-23 |
| Pfam |
CAP_domain (IPR014044) - T[101-208] 1.0E-16 |
| PRINTS |
Allrgn_V5/Tpx1 (IPR001283) - T[161-174] 8.2E-5 - T[183-199] 8.2E-5 - T[210-223] 8.2E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GAPR1_HUMAN | 34.667 % | 91.7 | 2.53E-23 |