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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S99....' > 
  2. Transcript 'KH2012:KH.C4.366.v2....' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g58115.01.t

Possible name(s)

SDC1; SDC2; SDC4

Gene model

Boschl.CG.Botznik2013.chr5.g58115

Location

chr5 [9,097,546 / 9,099,408]

Sequences

Amino acid sequence

Length: 90

>Boschl.CG.Botznik2013.chr5.g58115.01.p
EPVEKPDFDVETEDDVADAVATSASNPSFLAAIVVGGCIGLLFAVCVIMLLVFRMRKKDE
GSYALAYGLDKKPQGNYEYTKGVDSKEYYA

Nucleotide sequence

Length: 273

>Boschl.CG.Botznik2013.chr5.g58115.01.t
AGCCAGTGGAGAAGCCTGATTTTGATGTTGAAACTGAAGATGATGTAGCAGACGCAGTTG
CAACATCAGCATCCAATCCATCATTTCTTGCCGCTATAGTTGTCGGCGGCTGTATTGGTC
TTCTGTTCGCTGTTTGCGTGATAATGCTTCTCGTGTTCAGAATGCGCAAAAAGGACGAAG
GCAGTTATGCGCTTGCTTATGGACTAGACAAAAAGCCTCAAGGCAACTACGAGTACACCA
AAGGTGTTGATAGTAAAGAATATTATGCGTAAA

InterProScan

PANTHER
Syndecan (IPR001050) - T[24-90] 2.3E-26
Pfam
Syndecan/Neurexin_dom (IPR027789) - T[25-87] 2.5E-21
ProSitePatterns
Syndecan_CS (IPR030479) - T[53-63] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value