Aniseed - Transcript Card

Clone 'ciht028m01' >
Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g53672.01.t

Possible name(s)

WNT4; WNT5A; WNT5B

Gene model

Boschl.CG.Botznik2013.chr5.g53672

Location

chr5 [10,944,723 / 10,947,367]

Sequences

Amino acid sequence

Length: 216

>Boschl.CG.Botznik2013.chr5.g53672.01.p
MRPYTVYISEMLPEWGGCGDNTKYAYGFAKEFVDAIERDNLSPKRSKDRARKAMNLHNNE
AGRMVVVRGTKPSCRCNGLSGSCSMKTCWSQVPDFKKVGKTLRENHAKAFEMKTNTKGHL
RPRRPRKGIPTSTDLIYIEASPDYCRPNPRTGVPGTTGRECDKDSTDPNGCGLLCCGRGF
ERRKVEVVEKCRCKFQWCCRVRCEKCKRTVVKHICL

Nucleotide sequence

Length: 651

>Boschl.CG.Botznik2013.chr5.g53672.01.t
TGAGGCCGTACACAGTATATATAAGCGAAATGCTGCCGGAGTGGGGTGGATGTGGCGATA
ACACGAAATATGCCTACGGCTTTGCCAAAGAATTTGTGGACGCAATCGAACGGGACAACC
TGTCACCAAAACGCAGCAAAGATAGAGCAAGAAAGGCGATGAATCTCCACAACAACGAAG
CTGGAAGAATGGTGGTCGTCAGAGGGACAAAACCATCTTGTCGCTGCAATGGACTATCTG
GATCGTGCAGCATGAAAACATGCTGGTCCCAGGTGCCAGATTTCAAAAAAGTTGGCAAAA
CACTACGCGAAAATCACGCCAAGGCGTTCGAAATGAAAACAAACACAAAAGGACATTTGC
GACCGAGGAGGCCAAGGAAAGGTATTCCCACATCGACAGATCTTATATACATCGAAGCCT
CGCCAGACTACTGCAGACCAAATCCAAGAACAGGCGTGCCAGGGACGACGGGTCGAGAGT
GTGATAAGGACTCAACCGATCCGAACGGCTGTGGACTCTTGTGCTGCGGCAGAGGCTTCG
AACGCAGAAAGGTGGAGGTTGTCGAGAAGTGTCGCTGCAAATTTCAATGGTGCTGCAGGG
TGCGATGCGAAAAATGTAAACGGACTGTTGTCAAGCATATTTGCCTTTGAC

InterProScan

SMART	Wnt (IPR005817) - T[1-216] 2.0E-60
PRINTS	Wnt (IPR005817) - T[13-25] 7.0E-13 - T[75-89] 7.0E-13 - T[134-145] 7.0E-13
Pfam	Wnt (IPR005817) - T[14-215] 3.0E-74
PANTHER	Wnt (IPR005817) - T[14-215] 9.3E-85

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
WNT5A_HUMAN	51.741 %	224	1.89E-72
WNT5B_HUMAN	51.244 %	214	5.94E-69
WNT4_HUMAN	45.366 %	194	3.28E-61