- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g49715.01.t
Possible name(s)
EPHA4; EPHB2; EPHB3
Gene model
Location
chr5 [15,824,676 / 15,838,873]
Amino acid sequence
Length: 474
>Boschl.CG.Botznik2013.chr5.g49715.01.p
MNTQFSFISIFQWTEASNTDENGEPLRTFQVCGIRTPGQNNWFRTDYIELKEGAKNVFVE
VKFTIRSCHDIPNVASCKETFNLYYLEANSQHSGREKFMNERVYKKVDTIATDGRFPVES
HATNIETREIGPIDGKGIYVAFQDTGACMLIYYIRVYYKKCEDVITNLASFESTVTGPKV
TSLVKVTGKCVPNSIWTQNMFGPTMRCNGEGKWKVPDGECQCLPGYEPNEARTECLECSA
GQYKAHIGNGRCQTCPDNSLSIRRASVKCICSAGYYKSLKDGVDSPCTKSPTEPLNIQFS
VNKTSVDIKWSPPSYTGGRKDITYSITCMRCDSSYSLCSECGDNVDYEPRERYLSSPRVH
VTELSPHTNYRFRIFSYNGVTKLSGKEPRFSEVMLKTSEAPPSSVGSVRVIEEGRSEVLL
NWDSPRRPNGIILDYEIEYSSGGLDGNVIRRQNRTKSQTFRIRHLPKATSFIVQ
Nucleotide sequence
Length: 1,422
>Boschl.CG.Botznik2013.chr5.g49715.01.t
TATGAATACACAATTCAGTTTTATATCAATTTTCCAGTGGACGGAAGCGAGCAACACCGA
CGAAAACGGGGAGCCGCTCCGCACGTTTCAAGTGTGCGGGATCAGGACGCCGGGACAGAA
TAACTGGTTCAGAACGGACTATATCGAATTGAAGGAAGGCGCGAAGAATGTGTTTGTCGA
GGTTAAATTTACGATCAGATCATGCCACGACATCCCAAACGTCGCTTCTTGCAAGGAAAC
CTTCAACCTCTATTATCTGGAGGCCAATTCTCAGCATTCTGGGAGAGAAAAATTCATGAA
CGAGAGGGTTTATAAAAAGGTGGACACGATCGCCACGGATGGGCGTTTTCCTGTCGAGTC
GCACGCGACGAACATCGAAACGCGCGAAATTGGACCGATCGACGGGAAGGGAATATACGT
AGCCTTTCAGGATACCGGAGCCTGCATGTTGATTTATTATATCCGCGTTTACTACAAGAA
GTGCGAAGACGTGATAACCAATTTGGCAAGCTTCGAGAGCACCGTTACCGGACCGAAAGT
GACCTCGCTCGTGAAAGTAACCGGGAAATGCGTTCCCAATTCAATATGGACTCAAAATAT
GTTCGGCCCCACAATGCGTTGTAACGGGGAAGGCAAATGGAAAGTGCCGGACGGCGAATG
TCAATGCCTGCCGGGATATGAGCCCAATGAAGCACGTACCGAGTGTTTGGAATGTTCCGC
GGGGCAGTACAAAGCACATATCGGTAACGGACGATGCCAAACGTGTCCCGATAACAGCCT
GTCGATCAGGCGAGCTTCAGTGAAGTGCATATGCAGCGCTGGATACTACAAGTCGCTAAA
GGACGGCGTCGACAGCCCTTGCACAGAATCACCAACCGAGCCGCTAAATATTCAATTCTC
CGTGAACAAGACCTCAGTCGACATCAAATGGTCACCGCCATCTTACACGGGCGGCAGAAA
AGATATCACGTACAGCATCACTTGCATGCGTTGCGACTCGTCCTATTCCTTGTGCTCGGA
ATGCGGGGACAATGTCGACTACGAACCGCGGGAAAGATATCTGTCTTCGCCCAGAGTTCA
CGTCACGGAGTTATCTCCGCACACCAACTATCGCTTCAGGATATTCTCGTACAACGGAGT
CACGAAACTCAGCGGCAAAGAACCGAGGTTCTCCGAAGTCATGCTGAAAACGAGTGAAGC
GGCGCCATCTTCCGTCGGATCGGTCCGCGTGATAGAAGAAGGAAGATCTGAAGTTCTTCT
CAACTGGGACTCTCCGAGAAGGCCGAACGGGATCATTCTGGATTACGAAATTGAGTACTC
TAGCGGTGGCCTGGACGGCAACGTGATCAGAAGACAGAATCGCACTAAAAGTCAAACGTT
CAGGATCAGGCATTTGCCGAAAGCGACCTCTTTCATTGTGCA
| SMART |
Ephrin_rcpt_lig-bd_dom (IPR001090) - T[1-161] 1.2E-55 |
| ProSiteProfiles |
Ephrin_rcpt_lig-bd_dom (IPR001090) - T[1-166] 47.513 |
| Gene3D |
Galactose-bd-like_sf (IPR008979) - T[3-165] 6.0E-52 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[12-160] 4.08E-47 |
| Pfam |
Ephrin_rcpt_lig-bd_dom (IPR001090) - T[12-161] 1.9E-50 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[219-290] 1.02E-6 - T[328-344] 1.02E-6 |
| SMART |
Tyr-kin_ephrin_A/B_rcpt-like (IPR011641) - T[225-269] 1.1E-4 |
| Pfam |
Tyr-kin_ephrin_A/B_rcpt-like (IPR011641) - T[228-264] 1.9E-6 |
| SMART |
FN3_dom (IPR003961) - T[291-384] 2.0E-8 - T[402-471] 210.0 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[291-400] 13.665 - T[401-474] 13.373 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[291-473] 1.84E-26 |
| Gene3D |
Ig-like_fold (IPR013783) - T[291-391] 1.4E-24 - T[392-474] 1.4E-10 |
| CDD |
FN3_dom (IPR003961) - T[291-379] 4.6167E-9 - T[402-474] 2.64813E-7 |
| Pfam |
FN3_dom (IPR003961) - T[293-381] 7.8E-13 - T[404-473] 1.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EPHA4_HUMAN | 41.113 % | 372 | 2.76E-119 |
| EPHB3_HUMAN | 41.009 % | 357 | 2.32E-113 |
| EPHB2_HUMAN | 41.972 % | 362 | 4.72E-115 |