- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g44297.01.t
Possible name(s)
MALRD1; MAMDC4; MDGA2
Gene model
Location
chr5 [19,668,409 / 19,673,480]
Amino acid sequence
Length: 207
>Boschl.CG.Botznik2013.chr5.g44297.01.p
MFSVAVFHTYWYYKFLQDGYIFIDASRSKIGLRASLVSSQFKIDGPKCFRFWYHMHGTGI
GDLTIFKLIKKKMVNIWKTKGEKGNQWLEGMIDLQGNHIFSLVITATRGSDWKGDIALDD
FSITGGKCPTMTCDFETDNCGWIQETQNDQFNWTRRRGPTPSKNTGPSHDHTMKNANGTY
LYLEASKKQRFDEAWLMSPIIDPKDST
Nucleotide sequence
Length: 622
>Boschl.CG.Botznik2013.chr5.g44297.01.t
AATGTTCAGCGTCGCGGTGTTTCATACATATTGGTATTACAAATTTCTTCGGGATGGCTA
TATATTTATCGATGCTTCAAGAAGCAAAATCGGTTTGCGTGCAAGTTTGGTCAGCAGCCA
ATTCAAAATTGATGGTCCGAAATGCTTTCGATTTTGGTACCATATGCACGGTACAGGCAT
CGGAGACTTGACAATATTCAAACTAATTAAGAAGAAGATGGTAAATATTTGGAAAACCAA
AGGCGAAAAGGGAAATCAATGGCTTGAGGGAATGATCGATTTGCAAGGCAATCATATATT
TTCGTTGGTGATAACTGCAACAAGAGGATCCGACTGGAAAGGAGATATCGCCTTAGACGA
CTTCAGCATAACGGGCGGAAAATGTGCAACAATGACTTGCGATTTTGAAACTGACAATTG
CGGATGGATACAGGAGACGCAAAATGATCAGTTTAATTGGACAAGACGCAGAGGACCAAC
ACCATCGAAGAATACCGGACCGAGCCATGATCACACTATGAAAGACGCCAACGGAACTTA
TCTATATCTTGAGGCGTCGAAAAAGCAACGATTTGATGAGGCATGGTTGATGAGTCCGAT
CATAGACCCTAAAGACTCTACG
| SMART |
MAM_dom (IPR000998) - T[2-130] 2.4E-5 |
| Pfam |
MAM_dom (IPR000998) - T[18-129] 5.8E-22 - T[133-206] 4.0E-19 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[20-128] 2.85E-22 - T[128-205] 9.81E-17 |
| ProSiteProfiles |
MAM_dom (IPR000998) - T[20-130] 18.678 - T[131-207] 19.134 |
| PRINTS |
MAM_dom (IPR000998) - T[20-36] 4.6E-5 - T[47-58] 4.6E-5 - T[111-124] 4.6E-5 |
| CDD |
MAM_dom (IPR000998) - T[20-128] 4.14555E-24 - T[133-207] 8.00182E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AEGP_HUMAN | 31.034 % | 77 | 1.82E-16 |
| MDGA2_HUMAN | 34.586 % | 76.3 | 3.2E-16 |
| MALR1_HUMAN | 29.707 % | 99 | 4.73E-24 |
