- Region 'REG00000697' >
- Transcript 'KH2012:KH.S1404.2.v1...' >
- Molecular Tool 'Snail MO (Hudson 2015)' >
- Molecular Tool 'cicl12m24-MO (Hamada's MO)' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g35592.01.t
Possible name(s)
CDK12; CDK13; CDK9
Gene model
Location
chr5 [30,361,193 / 30,363,486]
Amino acid sequence
Length: 380
>Boschl.CG.Botznik2013.chr5.g35592.01.p
MTNKKDITLLDFPLCHDVAKYERITKIGQGTFGEVFKAKDKNTGRLVALKKVIMENEKEG
FPITALREIKILQQLKHESIVDLIEICRAKPTQYNRQKGSIYLVFELCDHDLAGLLSNAT
VKFTLGEIKKIMQQLLDGLFYIHRNKILHRDMKAANILITKTGTLKLADFGLARAFSYTK
AGQANRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGDTEQTQL
KLICQLCGSITPQVWPTVGKYDLYSKFELPKGQKRRVKERLKGYVKDQYALDLIDKLLCL
DPKHRIDSDEALNHDFFWTEPLPNDLTKMLSQHKTSMFEYLAPPRRVGAHPHARNNARQH
APTAAAARQQPTDPSYDRIF
Nucleotide sequence
Length: 1,143
>Boschl.CG.Botznik2013.chr5.g35592.01.t
CATGACGAATAAAAAAGACATTACCTTACTAGATTTCCCTTTATGTCACGATGTCGCCAA
ATACGAGCGGATCACGAAAATTGGACAAGGAACTTTTGGGGAGGTGTTCAAAGCAAAAGA
CAAGAATACCGGAAGACTTGTCGCTTTGAAGAAGGTAATAATGGAGAATGAAAAAGAGGG
GTTTCCAATAACGGCCCTGAGAGAAATCAAAATACTCCAGCAATTGAAGCATGAAAGTAT
TGTTGACTTGATTGAGATATGCAGAGCGAAGCCTACACAATATAATAGGCAAAAGGGATC
CATTTATCTGGTCTTTGAACTGTGCGATCATGATTTAGCGGGCCTACTAAGCAATGCGAC
TGTGAAGTTCACGTTGGGAGAAATCAAAAAGATAATGCAACAGCTTCTGGACGGACTATT
TTATATTCACCGAAATAAGATATTGCACCGAGACATGAAAGCAGCAAATATCCTTATAAC
GAAAACGGGTACTCTGAAACTGGCAGACTTCGGACTGGCTAGAGCGTTCAGTTACACCAA
GGCGGGCCAAGCAAACCGATACACTAACAGGGTCGTCACACTGTGGTATCGACCTCCTGA
ATTGCTTCTCGGAGAACGAGACTACGGGCCCCCTATCGACTTGTGGGGTGCGGGTTGCAT
AATGGCAGAGATGTGGACGAGAAGCCCCATTATGCAGGGCGACACTGAGCAAACGCAGTT
GAAGTTGATATGTCAATTGTGCGGCTCGATCACACCGCAGGTATGGCCGACTGTGGGAAA
GTACGATCTTTATTCAAAATTTGAACTTCCAAAGGGACAGAAAAGAAGAGTGAAGGAGCG
ATTGAAAGGATACGTCAAAGACCAATATGCGCTGGATCTCATCGATAAATTACTATGCTT
AGATCCGAAGCACCGTATAGACTCGGACGAAGCCCTCAATCATGATTTTTTCTGGACTGA
ACCTCTGCCAAACGATTTAACTAAAATGCTGTCTCAGCACAAAACTTCTATGTTTGAATA
TCTGGCTCCGCCGAGACGGGTCGGCGCTCACCCGCACGCAAGGAACAATGCGAGACAGCA
TGCCCCGACTGCAGCCGCAGCTAGGCAGCAGCCCACAGATCCCAGTTATGATCGTATATT
TTG
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[15-323] 4.32E-98 |
| SMART |
Prot_kinase_dom (IPR000719) - T[21-317] 8.1E-93 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[21-317] 1.1E-71 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[21-317] 44.23 |
| ProSitePatterns |
Protein_kinase_ATP_BS (IPR017441) - T[27-50] . |
| ProSitePatterns |
Ser/Thr_kinase_AS (IPR008271) - T[147-159] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDK9_HUMAN | 75 % | 566 | 0 |
| CDK13_HUMAN | 49.338 % | 302 | 2.35E-92 |
| CDK12_HUMAN | 50.331 % | 299 | 3.49E-91 |