- Transcript 'Boleac.CG.SB_v3.S10....' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C8.308.v1....' >
- Transcript 'KH2012:KH.C8.308.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g28782.01.t
Possible name(s)
PRICKLE1; PRICKLE2; TES
Gene model
Location
chr5 [28,661,908 / 28,671,763]
Amino acid sequence
Length: 555
>Boschl.CG.Botznik2013.chr5.g28782.01.p
MADVEVVSGVRDKILTHEVGAGAKCLKCGDKCPGLDLHFWRKICRNCKCKQEDHAVQDEV
SSRGIENIGKLLMHDQGQTIESTPAVKKSPPPTKPKTTTVSTTTKETVNGHVNAASTNTD
SVLPPPPPSEQAATAAEQPLKFTIDIGGKQHELDFGSATLDNSSLPPPPSTLYKSSVAVQ
SEEPPLPPPPPSTTISTPDLPPPPPEIQSYSQETTPPIPPLPKEYEQEDAQPVVTNEVVQ
QTQYTDAPPPPVPPPTDRRDSSSSSGSDVDKEENSSKYDWTPPIKDPKLAQEYIECLPKE
KQPIKGTDGAQYRRKQLMRQLPPHDQEPSACHDLTAQEKQEMEVFVTQYRQKALGVGNAD
GNAKIKNCENCGEGIKVGDVMVVAERAGPEKAWHPQCFVCQECKELLVDLIYFYHEDKIY
CGRHYCELHKPRCAACDELIFAPEYTQAEDCYWHLKHFCCWQCDQPLGGKNYVPHDNQPV
CIPCYEKAFAHRCATCQEVIAPNIEWVTFQEYHWHALPECFKCSNCSVSLVGMPCIPKGE
MVFCSSKCKNEKLSS
Nucleotide sequence
Length: 1,668
>Boschl.CG.Botznik2013.chr5.g28782.01.t
TGGCTGACGTTGAGGTAGTCTCAGGTGTTAGAGACGAAATACTCACGCACGAAGTGGGTG
CCGGTGCAAAATGTTTGAAATGTGGAGATAAATGCCCAGGGTTGGATTTACATTTTTGGA
GGAAAATATGCCGGAATTGCAAATGTAAGCAGGAAGATCATGCAGTACAAGATGAGGTTT
CCAGCCGTGGCATTGAAAATATTGGAAAACTGCTTATGCACGACCAGGGACAGACGATCG
AAAGTACGCCCGCAGTTAAAAAGTCCCCTCCACCTACAAAACCGAAGACGACGACGGTTT
CGACAACAACAAAGGAAACAGTCAACGGTCATGTAAATGCAGCATCTACGAACACAGACT
CTGTTCTCCCACCTCCCCCTCCCAGCGAGCAAGCCGCTACAGCAGCAGAACAACCCCTGA
AATTTACAATTGATATCGGCGGGAAACAGCACGAGCTTGACTTCGGCAGCGCCACGTTAG
ATAATTCTTCTCTGCCGCCACCGCCATCTACTCTGTACAAATCAAGCGTTGCCGTGCAAT
CGGAAGAGCCGCCACTGCCACCACCGCCGCCATCAACTACCATATCTACTCCGGATTTAC
CACCTCCGCCGCCGGAAATTCAATCCTATTCACAGGAAACCACGCCACCAATCCCGCCGC
TACCAAAAGAATATGAACAAGAAGACGCGCAACCCGTCGTAACGAATGAGGTTGTTCAAC
AAACACAGGACACTGATGCTCCGCCACCCCCTGTGCCACCTCCTACAGACAGGCGGGACT
CCTCCTCATCTTCAGGGTCAGACGTAGACAAGGAAGAGAATAGTAGTAAATACGATTGGA
CGCCGCCAATCAAAGATCCAAAACTGGCCCAGGAATACATCGAGTGTCTGCCAAAGGAAA
AACAACCGATAAAAGGCACTGACGGCGCGCAATACAGACGAAAGCAGTTGATGAGGCAAT
TGCCACCGCACGACCAAGAACCGAGCGCTTGCCACGATCTAACCGCTCAGGAAAAGCAAG
AGATGGAAGTCTTTGTGACCCAGTACAGACAGAAAGCGCTCGGCGTGGGAAACGCTGACG
GCAATGCGAAAATCAAGGATTGCGAAAACTGCGGAGAGGGAATCAAGGTCGGGGACGTGA
TGGTTGTGGCAGAGCGCGCCGGACCGGAGAAGGCTTGGCACCCGCAATGCTTCGTCTGCC
AGGAATGCAAGGAGCTCCTGGTCGACCTGATCTACTTCTACCACGAGGACAAAATCTACT
GCGGGCGGCATTACTGCGAGCTGCACAAGCCGAGATGCGCCGCTTGTGACGAGGTGATAT
TCGCTCCGGAGTACACGCAGGCAGAAGATTGCTACTGGCATCTGAAGCATTTCTGCTGTT
GGCAGTGCGATCAACCTCTCGGAGGAAAGAACTACGTCCCACACGATAACCAGCCCGTCT
GCATTCCATGCTACGAGAAAGCTTTTGCTCACAGATGCGCGACATGCCAGGAGGTAATCG
CGCCCAACATAGAATGGGTAACATTCCAGGAGTATCACTGGCACGCACTGCCGGAATGCT
TCAAATGCTCCAACTGCTCGGTTTCCCTCGTCGGAATGCCGTGTATACCGAAAGGCGAGA
TGGTATTCTGCTCAAGCAAATGCAAAAATGAAAAATTGTCGTCGTAGT
| ProSiteProfiles |
PET_domain (IPR010442) - T[259-366] 36.908 |
| CDD |
PET_testin (IPR033724) - T[276-357] 3.22716E-39 |
| Pfam |
PET_domain (IPR010442) - T[277-358] 1.5E-34 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[366-430] 10.049 - T[431-491] 12.652 - T[492-555] 7.494 |
| SMART |
Znf_LIM (IPR001781) - T[367-424] 4.5E-11 - T[432-484] 5.7E-14 - T[492-547] 3.1E-12 |
| Pfam |
Znf_LIM (IPR001781) - T[368-428] 3.5E-12 - T[433-489] 1.1E-11 - T[493-546] 4.8E-5 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[433-467] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 45.89 % | 279 | 3.28E-84 |
| PRIC1_HUMAN | 47.569 % | 286 | 6.04E-87 |
| TES_HUMAN | 48.232 % | 306 | 6.83E-99 |