Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g19302.01.t

Possible name(s)

ELK1; ELK3; ELK4

Gene model

Boschl.CG.Botznik2013.chr5.g19302

Location

chr5 [26,738,161 / 26,751,996]

Sequences

Amino acid sequence

Length: 220

>Boschl.CG.Botznik2013.chr5.g19302.01.p
MPDLSPRESKEDLEQRRRSIIMSHFAGNDTPTGSSVDSADYRNDNRHLSLDNMDDYDMNG
SPPDKMMRLDDHIPHHVVSQLPRVLDMNVTLWQFLLELLMDGNNSHLISWTSNDGEFKLH
NSEEVARMWGLRKNKTNMNYDKLSRALRYYYDKNIIRKVNGQKFVYKFVSFPEIIKTETK
IPFRVKMERMTHGSSESADEGRQSPNALLPSESDKSEVFK

Nucleotide sequence

Length: 660

>Boschl.CG.Botznik2013.chr5.g19302.01.t
TATGCCTGACTTAAGTCCGCGTGAGAGTAAAGAAGATTTGGAACAAAGGCGCAGGAGCAT
TATAATGAGCCATTTCGCCGGAAACGATACTCCCACCGGAAGTTCTGTGGATTCTGCGGA
TTATAGAAACGATAATCGTCATTTGTCGTTGGATAATATGGACGACTACGACATGAACGG
ATCCCCGCCTGATAAGATGATGCGACTGGACGACCATATCCCTCACCACGTCGTGTCGCA
ACTACCCAGAGTGCTCGACATGAATGTCACCCTCTGGCAGTTCCTGCTGGAGCTGCTCAT
GGACGGTAACAACAGCCATCTGATCAGCTGGACGTCGAACGACGGCGAATTTAAGTTGCA
CAATTCCGAAGAAGTGGCCCGGATGTGGGGACTGCGGAAGAATAAGACGAACATGAATTA
CGACAAGCTCAGCCGCGCGCTCCGGTATTATTACGATAAGAACATCATCAGGAAAGTGAA
CGGGCAGAAATTCGTCTACAAGTTCGTGTCGTTTCCCGAGATCATCAAGACAGAGACAAA
GATACCCTTCAGGGTTAAGATGGAACGCATGACTCACGGATCGTCTGAGAGCGCAGACGA
AGGCCGCCAGTCGCCCAACGCTCTGCTGCCGTCCGAGTCAGACAAATCCGAAGTATTCAA

InterProScan

Gene3D	WH-like_DNA-bd_sf (IPR036388) - T[52-186] 1.5E-44
SMART	Ets_dom (IPR000418) - T[88-173] 5.4E-55
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[88-196] 2.4E-47
PRINTS	Ets_dom (IPR000418) - T[89-102] 3.2E-29 - T[113-131] 3.2E-29 - T[132-150] 3.2E-29 - T[151-169] 3.2E-29
ProSiteProfiles	Ets_dom (IPR000418) - T[89-169] 38.371
Pfam	Ets_dom (IPR000418) - T[91-169] 9.7E-36
ProSitePatterns	Ets_dom (IPR000418) - T[91-99] . - T[135-150] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ELK1_HUMAN	75.258 %	165	3.39E-49
ELK3_HUMAN	66.019 %	143	5.79E-41
ELK4_HUMAN	80.556 %	137	1.22E-38