- Transcript 'KH2012:KH.S1029.2.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S57...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr4.g03358.01.t
Possible name(s)
PAPD4; ZCCHC11; ZCCHC6
Gene model
Location
chr4 [6,626,701 / 6,634,304]
Amino acid sequence
Length: 547
>Boschl.CG.Botznik2013.chr4.g03358.01.p
GLNHIEIIESLAKSLRKHSKLRHIIPITTAKVPIVKFSVRSGLEGDISLYNLLAQRNTTM
LALYAQIDKRCQILGYAIKAFVKECEIGDASRGSLSSYAYILLVIYYLQQRDPPVLPVLQ
ELHEGDKPELMVDGWNSWFFDDIDNLDKVWQRRNTESEGELWLGLLRFYTEDFDYGRHVV
SIRQKRLLTSFEKEWTSKFICIEDPFNLSHNLGSGVSRKMTNFIKRIFVKARERFGNPPG
PELENYRRCDAYFFDSEALRDGQEVPNDRCCKICGKIGHFLKDCPKKRMRKKGNDEDKND
GGCFICGKPGHMKRECPNSVKSPKPIEPTPAVAYRFRRPDIFLRHNDRPSPGKPQQQISP
NRNKRSPFPSGGPPNFIRNLSGEFEGGATNQHFLPPHQTPPLGAMLTLAEIESKIPGSGQ
KKNFPQRQNNPPQPNRALYTQHSHPPMSPLQYHPQFSPYPPVLRNINTPPTGQFYHPMPQ
NRMQRPALHHSGGFTDFTEDPIPTQTFINSGGDTPHQRQVHLAQPSDSPYHSYPPNRRER
NSDNQRM
Nucleotide sequence
Length: 1,644
>Boschl.CG.Botznik2013.chr4.g03358.01.t
GTTTGAACCACATTGAAATCATCGAGTCTCTGGCGAAATCCTTGCGCAAACATTCCAAGC
TTCGTCACATCATACCGATTACTACGGCTAAGGTCCCGATCGTCAAGTTCTCAGTGCGGT
CGGGCCTGGAGGGCGACATCAGTCTTTACAACTTGCTGGCACAAAGGAACACGACCATGT
TGGCTCTGTATGCTCAAATCGACAAACGCTGTCAAATTCTGGGCTACGCCATCAAAGCGT
TTGTGAAAGAATGTGAAATCGGGGACGCGTCACGAGGCTCTCTCTCTTCTTACGCGTATA
TTTTGCTGGTCATTTACTATCTGCAGCAACGAGACCCGCCCGTTCTGCCTGTTTTGCAAG
AGGTTCACGAGGGCGATAAACCCGAACTGATGGTGGACGGGTGGAATTCGTGGTTTTTCG
ATGATATCGACAATTTGGACAAAGTGTGGCAACGCAGAAACACAGAGAGCGAGGGGGAAC
TGTGGCTGGGTCTGCTGCGATTCTACACAGAGGACTTCGATTATGGTAGGCACGTCGTGT
CTATAAGGCAGAAACGATTGCTGACTTCGTTCGAGAAGGAATGGACGTCGAAATTCATCT
GCATCGAAGACCCGTTCAATTTGAGCCACAATCTCGGATCGGGCGTGTCCCGAAAAATGA
CCAATTTCATCAAGAGGATTTTCGTGAAAGCCAGAGAACGATTTGGCAATCCGCCCGGAC
CAGAGTTGGAGAATTACCGGAGAGGCGACGCGTATTTCTTCGACTCTGAAGCTCTGAGAG
ACGGGCAGGAGGTGCCGAACGATCGGTGTTGCAAAATTTGCGGAAAAATCGGACATTTTT
TGAAAGATTGCCCAAAAAAGAGAATGAGGAAGAAAGGAAACGATGGGGACAAAAACGATG
GCGGATGCTTCATCTGCGGAAAACCAGGTCACATGAAGCGCGAATGTCCAAACTCAGTAA
AATGTCCTAAACCGATAGAACCAACGCCGGCTGTGGCATATCGATTCCGAAGGCCCGATA
TCTTCCTGAGGCACAACGACAGGCCAAGCCCCGGAAAACCCCAACAGCAGATCTCCCCAA
ACCGGAATAAAAGGTCCCCTTTTCCGTCGGGCGGCCCCCCTAATTTCATCAGGAACCTTT
CCGGAGAATTTGAAGGTGGGGCTACCAACCAGCATTTCCTACCCCCGCATCAGACCCCGC
CTCTGGGCGCGATGTTAACATTGGCGGAAATTGAATCGAAAATTCCGGGTAGTGGACAGA
AAAGAAATTTCCCACAAAGACAAAACAATCCTCCGCAACCCAACCGAGCTCTCTACACCC
AACACTCTCACCCACCCATGTCACCCCTACAGTACCACCCTCAATTCTCACCCTACCCCC
CGGTTTTGAGGAATATCAACACCCCTCCAACGGGGCAATTTTATCACCCTATGCCACAAA
ATAGGATGCAGCGACCAGCTCTACATCACAGCGGGGGCTTCACTGACTTCACAGAAGACC
CCATTCCGACTCAGACTTTCATAAATTCCGGGGGCGATACCCCACATCAAAGGCAGGTTC
ATCTCGCCCAGCCTAGCGACAGCCCGTATCATTCTTACCCACCCAACAGGAGAGAACGAA
ACTCGGACAATCAAAGAATGTGAT
| Pfam |
PAP_assoc (IPR002058) - T[159-210] 6.5E-15 |
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[265-319] 1.15E-8 |
| Pfam |
Znf_CCHC (IPR001878) - T[270-286] 0.0014 - T[302-318] 4.3E-6 |
| SMART |
Znf_CCHC (IPR001878) - T[270-286] 0.011 - T[302-318] 9.7E-6 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[271-286] 9.587 - T[303-318] 10.889 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TUT4_HUMAN | 46.139 % | 401 | 3.97E-125 |
| TUT7_HUMAN | 62.284 % | 377 | 9.96E-117 |
| GLD2_HUMAN | 33.178 % | 119 | 7.09E-29 |