Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr2.g62079.01.t

Possible name(s)

MTHFD1; MTHFD2; MTHFD2L

Gene model

Boschl.CG.Botznik2013.chr2.g62079

Location

chr2 [1,991,181 / 1,998,763]

Sequences

Amino acid sequence

Length: 249

>Boschl.CG.Botznik2013.chr2.g62079.01.p
ITSNTIHVSTAVTQDELLHLVGTVNDDASVDGLLVQLPLPEHIDERTVCNSVTTEKDVDG
FHVTNVGRLCLDIPSILPATPAGVWEMLQRSGVDTFAKTAVVCGRSKNVGMPIAMLLHTD
HRHERPGGDATVTMTHRFTPKEQLKVFTKQADIVIVAAGKPNLITADMIKEGACVIDVGI
NRIKDKKTGRTKLVGDVDFEGVRKVAGYITPVPGGVGPMTVAMLCRNTLIASKEFNKAEQ
PSSTRLWRL

Nucleotide sequence

Length: 752

>Boschl.CG.Botznik2013.chr2.g62079.01.t
AATAACCAGCAACACAATACACGTGTCAACAGCAGTCACACAGGATGAATTGTTGCACCT
TGTTGGCACAGTCAATGATGATGCATCTGTAGACGGTCTACTTGTCCAATTGCCTCTGCC
GGAACACATTGGTGAAAGAACAGTGTGCAATTCTGTGACAACGGAAAAAGATGTCGACGG
TTTCCATGTAACGAACGTCGGACGGTTATGCCTCGATATTCCGTCTATTCTGCCGGCTAC
CCCTGCTGGAGTTTGGGAGATGTTACAGCGTTCCGGTGTCGATACTTTCGCAAAAACGGC
TGTCGTGTGCGGACGTTCCAAAAATGTGGGGATGCCTATAGCGATGTTGCTACACACCGA
CCATAGGCACGAAAGGCCAGGCGGAGATGCCACGGTGACGATGACTCACAGATTCACACC
GAAGGAGCAATTGAAAGTGTTCACGAAACAGGCAGATATAGTTATCGTGGCTGCTGGAAA
ACCGAACCTTATTACTGCTGACATGATCAAGGAGGGTGCTTGCGTCATCGACGTGGGCAT
AAATCGTATAAAGGACAAAAAGACTGGCAGAACTAAACTTGTTGGGGATGTCGACTTTGA
AGGTGTCAGAAAAGTTGCCGGCTACATTACACCCGTACCTGGTGGCGTCGGTCCTATGAC
TGTGGCGATGCTCTGTAGAAACACGCTGATCGCGTCGAAAGGGTTCAATAAAGCCGAGCA
ACCATCCTCAACCAGACTCTGGCGGCTATAGG

InterProScan

PANTHER	THF_DH/CycHdrlase (IPR000672) - T[1-235] 2.5E-114
Hamap	THF_DH/CycHdrlase (IPR000672) - T[1-236] 22.976
Pfam	THF_DH/CycHdrlase_cat_dom (IPR020630) - T[1-59] 2.3E-16
PRINTS	THF_DH/CycHdrlase (IPR000672) - T[13-40] 5.4E-68 - T[48-69] 5.4E-68 - T[93-113] 5.4E-68 - T[152-181] 5.4E-68 - T[192-208] 5.4E-68 - T[209-227] 5.4E-68
ProSitePatterns	THF_DH/CycHdrlase_CS (IPR020867) - T[14-39] . - T[213-221] .
SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[61-231] 4.78E-43
Pfam	THF_DH/CycHdrlase_NAD-bd_dom (IPR020631) - T[62-234] 7.8E-62

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
C1TC_HUMAN	40.244 %	160	9.0E-45
MTD2L_HUMAN	66.383 %	330	3.83E-114
MTDC_HUMAN	69.583 %	336	3.07E-116