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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.123.v1....' > 
  2. Transcript 'Cisavi.CG.ENS81.R13....' > 
  3. Transcript 'KH2012:KH.S691.3.v1....' > 
  4. EST 'AHC0AAA228YP06_RM1' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr2.g37736.01.t

Possible name(s)

SGSM1; SGSM2; TBC1D25

Gene model

Boschl.CG.Botznik2013.chr2.g37736

Location

chr2 [8,814,551 / 8,819,872]

Sequences

Amino acid sequence

Length: 168

>Boschl.CG.Botznik2013.chr2.g37736.01.p
MCDLAAPLLLLMDDESKVFSCFCKLMQRMENNFPTGKAMDAHFANMRSLIQVLDSELFEL
MHQKGDYTHFYFCYRWFLLDFKRELSYDNDVFVVWETIWAARHVCSEQFVLFFALALLHN
YRDIVLDNEMDFTDIIKFFNEMAERHNANKILKIAQNFVYEVQSMISK

Nucleotide sequence

Length: 507

>Boschl.CG.Botznik2013.chr2.g37736.01.t
TGTGCGACCTCGCGGCTCCATTGCTGCTTTTAATGGACGACGAGAGCAAAGTATTCAGTT
GCTTTTGCAAGCTGATGCAGAGAATGGAAAATAACTTCCCGACTGGAAAAGCCATGGACG
CTCATTTTGCCAACATGAGATCGCTGATACAGGTTCTCGACTCTGAGCTATTTGAATTAA
TGCATCAGAAAGGAGATTATACCCACTTTTACTTCTGTTATCGATGGTTCTTGCTCGATT
TTAAAAGAGGGTTGTCGTACGATAATGATGTATTTGTTGTTTGGGAAACGATATGGGCTG
CTAGGCACGTCTGTTCTGAGCAATTTGTTCTGTTCTTCGCCTTGGCTCTTCTGCACAACT
ATCGAGACATCGTTCTGGACAACGAAATGGATTTCACTGATATTATAAAGTTCTTCAACG
GAATGGCGGAGCGACACAATGCTAACAAGATTCTCAAGATCGCTCAAAACTTTGTGTATG
AAGTACAGAGCATGATATCGAAGTAGG

InterProScan

ProSiteProfiles
Rab-GTPase-TBC_dom (IPR000195) - T[1-102] 18.535
Pfam
Rab-GTPase-TBC_dom (IPR000195) - T[1-123] 3.7E-19
SUPERFAMILY
Rab-GTPase_TBC_sf (IPR035969) - T[38-159] 2.62E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SGSM1_HUMAN 74.096 % 279 2.38E-88
SGSM2_HUMAN 70.482 % 266 3.89E-84
TBC25_HUMAN 39.216 % 92.4 2.57E-22