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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R435...' > 
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr2.g37735.01.t

Possible name(s)

SGSM1; SGSM2; TBC1D15

Gene model

Boschl.CG.Botznik2013.chr2.g37735

Location

chr2 [8,807,370 / 8,814,084]

Sequences

Amino acid sequence

Length: 403

>Boschl.CG.Botznik2013.chr2.g37735.01.p
RSSLKVLCHTMRRQIISRAFYGWLAHCRHLSTVRTHLSALILPDSSPLEVEQESPINLEV
WSSFLEDGKIVDTEAMMKRVYFGGIQHEMRIIIWPFLLNHYPLDSNCEERERIDAESVKD
YEDVMREWRVAETTIVQRQKISLAAKLSYDSFASSSSSLDGPLKQFVPVMRKQSTMSDVF
ASLDQDASTSADVNSSSLDSSQATNNLRDRVMRKRYAMKDGRDPSKSDSKASDHTPYSSM
STDYSNIAQRCSSITSSVLDAVGDSINEDIKLDNIDECQPESEMTREDIAASESGSDSKS
ANRKPPSLVKQDGIDMEAGLNQGESQDLDEVDESYLDRGSPVCELSNELLESFGLNLHRI
EKDVHRCDRNHEYFTNGENLEKLRNIMCSYVWRHLDIGYMQVI

Nucleotide sequence

Length: 1,213

>Boschl.CG.Botznik2013.chr2.g37735.01.t
CGCAGTTCCCTCAAAGTATTGTGTCACACAATGCGTCGTCAGATCATTTCAAGGGCTTTT
TATGGCTGGCTGGCTCATTGCCGTCATCTGTCGACCGTACGCACACACCTTTCTGCCCTG
ATCTTGCCGGACAGCTCTCCGCTAGAGGTGGAGCAGGAATCGCCCATCAATTTGGAAGTG
TGGAGTTCCTTTCTTGAAGATGGAAAGGTTGTCGACACAGAGGCTATGATGAAACGAGTG
TATTTCGGCGGAATACAACACGAGATGCGAATCATTATTTGGCCGTTTTTACTAAATCAC
TATCCACTGGATAGCAACTGTGAAGAGAGAGAACGGATAGACGCTGAATCGGTAAAAGAT
TACGAGGATGTGATGCGTGAATGGCGCGTCGCTGAGACCACCATAGTTCAAGGGCAGAAG
ATAAGTTTGGCCGCAAAGTTATCGTACGACAGTTTTGCAAGTTCGTCATCAAGTTTAGAT
GGGCCTCTCAAACAGGTTGTTCCTGTTATGCGAAAGCAATCGACGATGAGCGATGTGTTT
GCGTCTCTGGATCAAGACGCTTCCACCAGCGCCGATGTGAACAGCTCGAGTCTTGATAGC
TCACAAGCCACGAACAATCTTCGCGACCGAGTAATGAGAAAACGATACGCGATGAAAGAT
GGAAGGGATCCGTCCAAGGGCGACTCGAAAGCCAGCGACCACACTCCATATTCGTCAATG
AGCACCGATTATTCTAACATAGCTCAACGGTGTTCTTCAATCACAAGCTCTGTGTTAGAC
GCCGTAGGAGACAGCATAAACGAGGATATTAAATTGGACAATATCGACGAGTGTCAACCA
GAATCCGAGATGACGAGAGAAGACATTGCAGCCAGTGAGAGTGGGTCCGACTCCAAATCT
GCTAATCGAAAGCCACCGTCGCTGGTGAAACAAGATGGTATTGATATGGAAGCTGGATTG
AACCAAGGTGAATCACAAGATTTGGACGAAGTGGACGAGTCTTACCTTGATAGAGGATCT
CCTGTATGTGAATTGTCGGACGAGTTGCTGGAGAGCTTCGGCCTCAATTTGCATCGGATC
GAAAAGGACGTGCATCGCTGCGACCGTAATCATGAATATTTCACAAACGGCGAAAATCTC
GAGAAGCTCCGGAATATTATGTGCAGCTACGTGTGGAGGCATTTAGATATTGGATACATG
CAGGTAATTTAGA

InterProScan

SUPERFAMILY
Rab-GTPase_TBC_sf (IPR035969) - T[59-123] 8.89E-26 - T[343-401] 8.89E-26
ProSiteProfiles
Rab-GTPase-TBC_dom (IPR000195) - T[84-403] 11.513
Pfam
Rab-GTPase-TBC_dom (IPR000195) - T[356-401] 1.6E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SGSM1_HUMAN 33.114 % 205 1.77E-58
SGSM2_HUMAN 34.867 % 209 5.41E-60