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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr2.g00176.01.t

Possible name(s)

TRIM33; TRIM36; TRIM56

Location

chr2 [5,498,900 / 5,503,403]

Sequences

Amino acid sequence

Length: 309

>Boschl.CG.Botznik2013.chr2.g00176.01.p
MLQGINPQLEDIAGHRPYIDTVAENLPRKKNPKGAIPQGAAGNGAGSRPSAKQRYDVTIP
NSNMRKAQAKNDSTPSTSTDDDGSSNPARKSVYGNVRRASKTVFTGKMEILEERNSFPTK
SASPEDKESAKEESSSDQDTADTVVQHHYDQHQSHLHADVPWESRKPNSPIDEELENADQ
VIVEQSEQNQIQTNVPEATKFLTTLCRDHKRRKAGENTDAVLFCKICLQAVCYKCAFERH
KDHDVLPLASAVKVIRLKMAERKREIENSISQMRGRRKIMESSSEDVRKRIKSQFERTVE
RLQEKAKKL

Nucleotide sequence

Length: 930

>Boschl.CG.Botznik2013.chr2.g00176.01.t
TGCTACAAGGCATAAATCCACAGTTGGAAGATATAGCAGGCCATCGTCCCTACATCGATA
CTGTAGCCGAAAACCTGCCCCGTAAAAAAAATCCAAAAGGCGCCATACCTCAAGGCGCGG
CCGGCAATGGTGCTGGCAGTAGACCGTCGGCGAAGCAACGATATGACGTGACTATACCGA
ACAGCAACATGCGTAAAGCACAGGCAAAGAATGATTCGACTCCGAGCACAAGCACAGATG
ATGATGGATCTAGCAATCCTGCGAGAAAATCAGTCTACGGTAACGTTCGCAGAGCGTCGA
AGACCGTATTCACAGGAAAGATGGAAATTCTAGAAGAACGCAACAGTTTCCCCACGAAAT
CCGCGTCGCCTGAAGACAAAGAGTCGGCCAAAGAGGAATCTTCATCTGATCAGGACACTG
CAGACACTGTCGTACAGCATCACTACGATCAACACCAGTCACATTTGCACGCGGACGTAC
CTTGGGAGAGCAGAAAACCGAACTCGCCCATTGATGAAGAGCTTGAGAACGCAGACCAAG
TGATCGTGGAACAGTCAGAACAGAATCAAATACAGACGAATGTACCGGAAGCCACAAAGT
TTTTAACCACCTTGTGCCGCGATCACAAACGTCGGAAAGCGGGAGAAAATACGGACGCAG
TCCTGTTCTGTAAGATTTGTCTCCAAGCTGTTTGTTACAAATGCGCCTTCGAGCGTCACA
AAGATCATGACGTCCTGCCATTGGCCTCTGCGGTGAAAGTGATTAGAGTAAAAATGGCTG
AGAGAAAACGAGAAATTGAAAACAGCATATCACAGATGCGCGGAAGGAGAAAGATTATGG
AGGCCAGTTCAGAAGACGTCCGAAAACGAATCAAGTCCCAATTCGAAAGAACAGTGGAAA
GACTTCAAGAAAAAGCGAAGAAATTATGAG

InterProScan

Pfam
E2F-assoc_phosphoprotein (IPR019370) - T[172-296] 6.8E-6
Pfam
Znf_B-box (IPR000315) - T[204-248] 2.4E-5
CDD
Znf_B-box (IPR000315) - T[204-248] 1.6741E-7
ProSiteProfiles
Znf_B-box (IPR000315) - T[205-248] 10.025

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value