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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr1.g57068.01.t
Possible name(s)
NEB; NEBL; NRAP
Gene model
Location
chr1 [3,742,337 / 3,749,740]
Amino acid sequence
Length: 898
>Boschl.CG.Botznik2013.chr1.g57068.01.p
MTSQKEYTKEADISKQHHNLPADYPPLVQARENARNVSDVEYQKQKAETVKGYRGFQTME
AKHHPAVQLAAKSSELYSQNAYKEDWEAEKDLMYYPVHITPGYESQAEASKLQSDKKYKE
GYDEAKEKNRYFVTETEQYKAMKDTGLATSERNYKKEYENTKSNVVSMKETNEMIRAKEL
RPVQMQKLYTDDSKRMLQNVNISSDLQSISHAVATQKMSSKDAYAAEYKQTMVGKSPHNV
AVAYPEYEHLQKVAKDSSTTEYTKDAKKQSHHHNLPVDYPEFVRAKENAKNASDMEYKKD
LRKVTDSYRGYQTMDSAEHPVVKQAVKATELSSEKAYKEDWEYDKSMICYPVHITPGYEA
ISDIKNIQSDAMYKQNYENEKEKNAYLVTDTEQYKTMKETDQVTSKRKYNEEHEKNKAKI
ISMQETPEMKMAKDLNPFQSKKLYSENSKEAMRNVNVGMDIQEIAHAVSTQKMASKDQYI
DDYKRNVVGKAPHDVNNAYPEYEISKKASILASKNVYKKEAKKAMHQHNLPLDYPEFVQA
KENAKNTSQIEYTKQRAEAIKSYRGFQTMDSTEHPVVKQGLKAAELMSDKAYREDWEYDK
AMIYYPVHITPGYESQAEIGKVQSDVKYKEDFEKSKEKNAYVVTDTEAYKQMKDVETASS
TVKYQEEYLKNKGKMLSIETTPEMQLSQXLRPIQTDFEKNIVGKPPHXTGIXYPEYKHHX
DVGKMISQPNYTKDAESKMHTHNLPLDYPEFVRAKTNAKNASDIEYHKQQKQVIDSYRGF
QTMDSKDHPVVQQGMKAAELISDILYKEDWQNDKDMIYYPVHITPGYESQIEAGKALSEA
NYKKDFSKTKEQNRYFVTDTEQYKEMKRIDESRSNVSIFNVGSNYFHSLVFNAEMLQL
Nucleotide sequence
Length: 2,697
>Boschl.CG.Botznik2013.chr1.g57068.01.t
TGACGAGTCAGGAAGAATATACGAAGGAGGCGGACATTTCCAAGCAGCACCACAATCTCC
CTGCAGACTACCCACCTCTCGTACAGGCACGGGAGAATGCCAGGAATGTCAGCGATGTGG
AATATCAAAAACAGAAAGCCGAAACGGTGAAAGGATATCGCGGATTCCAAACTATGGAAG
CAAAACACCATCCAGCAGTCCAGCTAGCTGCGAAATCATCCGAATTATACTCTCAGGACG
CATATAAAGAAGACTGGGAAGCTGAAAAAGATCTGATGTATTATCCCGTTCATATCACGC
CGGGATACGAATCTCAGGCTGAAGCGTCAAAGCTCCAGAGCGACGAAAAGTACAAAGAAG
GTTACGACGAAGCGAAAGAGAAGAACCGATATTTTGTTACCGAAACGGAACAGTATAAAG
CCATGAAAGACACGGGGCTTGCTACTTCCGAGGGAAATTACAAAAAAGAATACGAGAACA
CGAAATCCAATGTCGTCTCAATGAAAGAAACAAATGAAATGATTCGCGCAAAGGAACTGC
GCCCGGTGCAAATGCAAAAACTCTACACGGATGACTCAAAAAGAATGCTTCAAAACGTGA
ACATAAGCTCAGGTCTTCAAAGCATCTCGCATGCAGTTGCGACTCAGAAAATGTCGTCAA
AGGATGCTTACGCTGCCGAATACAAACAGACAATGGTCGGGAAGAGTCCGCACAATGTCG
CCGTGGCGTACCCCGAATACGAACACCTACAGAAGGTAGCGAAAGACAGCAGCACTACCG
AATATACGAAAGACGCGAAGAAGCAGAGCCACCATCACAATCTGCCGGTGGACTATCCCG
AATTCGTTCGGGCAAAGGAGAACGCTAAAAACGCCAGCGATGTGGAGTACAAGAAAGATT
TGCGGAAAGTTACCGATTCGTATCGCGGATATCAGACGATGGACAGTGCAGAACACCCTG
TCGTTAAACAGGCCGTGAAAGCAACCGAGTTATCTTCAGAGGAAGCGTACAAGGAAGACT
GGGAATATGACAAGAGCATGATTTGCTACCCAGTGCACATCACGCCAGGCTATGAAGCAA
TATCTGATATCAAAAATATTCAAAGCGATGCGATGTATAAGCAAAATTATGAAAATGAGA
AGGAAAAGAACGCCTATCTCGTTACCGACACTGAACAATACAAGACTATGAAGGAAACTG
ACCAAGTCACCTCAAAGGGAAAATATAACGAGGAACACGAGAAAAACAAAGCAAAGATAA
TATCAATGCAAGAAACTCCAGAAATGAAAATGGCCAAAGACCTCAATCCATTTCAGAGTA
AAAAACTTTACTCGGAGAACTCCAAGGAAGCAATGAGGAATGTCAATGTTGGAATGGGTA
TACAAGAGATCGCTCACGCTGTTTCCACACAAAAGATGGCTTCAAAGGACCAGTACATCG
ATGACTATAAAAGGAATGTGGTAGGGAAAGCTCCGCATGATGTCAATAATGCATATCCGG
AATACGAGATCTCCAAGAAAGCTTCTATTCTTGCTAGCAAGGACGTATACAAAAAAGAAG
CCAAGAAAGCCATGCATCAACACAACTTACCGCTCGACTATCCGGAGTTTGTGCAAGCAA
AAGAAAATGCGAAAAACACTAGTCAGGTTGAGTATACCAAACAGCGGGCCGAGGCGATTA
AATCCTATCGCGGGTTCCAGACGATGGATAGCACCGAACATCCCGTGGTGAAGCAAGGCT
TGAAAGCGGCTGAACTCATGTCGGATGAAGCTTATCGCGAAGACTGGGAATACGATAAAG
CCATGATCTACTATCCAGTTCATATTACTCCGGGATACGAATCGCAGGCAGAAATTGGCA
AAGTGCAGAGTGATGTGAAATACAAAGAAGATTTCGAGAAATCGAAGGAGAAGAATGCGT
ACGTGGTTACTGACACGGAAGCCTACAAACAAATGAAAGACGTCGAAACTGCATCGTCAA
CCGTAAAGTATCAAGAAGAGTATCTGAAAAACAAGGGGAAAATGCTAAGCATCGAAACCA
CTCCCGAAATGCAGCTATCCCAAGANTTACGGCCGATTCAAAGGGATTTTGAGAAGAATA
TTGTCGGCAAACCTCCTCACGANACGGGGATCGCNTATCCAGAATACAAGCATCACAGNG
ACGTCGGGAAAATGATCAGCCAGGCGAACTATACGAAAGATGCGGAAAGCAAAATGCACA
CTCACAACCTCCCTTTGGACTACCCTGAATTTGTGAGGGCAAAAACAAATGCCAAAAATG
CAAGTGATGTCGAGTACCACAAGCAGCAGAAGCAAGTTATCGACTCGTACCGCGGCTTCC
AAACGATGGACAGCAAGGACCACCCTGTCGTGCAGCAAGGCATGAAGGCCGCCGAGTTAA
TTTCTGACGTACTTTACAAAGAGGATTGGCAAAATGATAAGGACATGATCTACTACCCGG
TTCATATCACGCCGGGTTACGAGTCGCAAATTGAGGCCGGCAAAGCTCTGAGCGAAGCGA
ACTATAAGAAAGATTTTTCCAAGACAAAGGAACAGAATCGGTACTTTGTCACCGATACTG
AACAATACAAGGAGATGAAGAGAATTGATGAGTCAAGATCCAACGTAAGTATCTTTAATG
TAGGCTCGAATTATTTTCATTCATTGGTATTTAATGCTGAAATGTTACAATTATGAC
| ProSiteProfiles |
Nebulin_repeat (IPR000900) - T[1-16] 4.942 - T[17-51] 8.677 - T[57-91] 9.043 - T[93-127] 9.226 - T[129-163] 8.703 - T[164-198] 5.02 - T[199-233] 6.404 - T[245-271] 5.151 - T[272-306] 11.264 - T[312-346] 10.062 - T[355-382] 7.58 - T[384-418] 9.539 - T[419-453] 7.841 - T[454-488] 6.875 - T[500-526] 6.378 - T[527-561] 7.92 - T[567-601] 9.487 - T[603-637] 9.069 - T[639-673] 8.677 - T[714-740] 5.098 - T[741-775] 8.39 - T[781-815] 10.062 - T[817-851] 7.188 |
| SMART |
Nebulin_repeat (IPR000900) - T[18-48] 1.3 - T[56-88] 1.6 - T[94-124] 1.0 - T[130-160] 26.0 - T[165-195] 170.0 - T[238-268] 70.0 - T[273-303] 1.9E-5 - T[314-343] 0.29 - T[349-379] 8.1 - T[385-415] 84.0 - T[420-450] 18.0 - T[455-485] 130.0 - T[493-523] 18.0 - T[528-558] 0.31 - T[569-598] 3.5 - T[604-634] 1.2 - T[640-670] 51.0 - T[707-737] 83.0 - T[742-772] 8.4E-4 - T[780-812] 0.27 - T[818-848] 47.0 |
| Pfam |
Nebulin_repeat (IPR000900) - T[23-48] 2.2E-5 - T[278-303] 3.1E-8 - T[533-554] 8.5E-7 - T[621-636] 8.4E-5 - T[747-769] 2.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NEBL_HUMAN | 24.671 % | 108 | 4.81E-24 |
| NRAP_HUMAN | 23.077 % | 128 | 4.59E-30 |
| NEBU_HUMAN | 24.114 % | 129 | 3.65E-30 |