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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr1.g50644.01.t

Possible name(s)

DENND1A; DENND1B; DENND1C

Location

chr1 [4,477,557 / 4,479,375]

Sequences

Amino acid sequence

Length: 605

>Boschl.CG.Botznik2013.chr1.g50644.01.p
MEQSKKPPKQVYICFFIVELREDGTFTKGCTYPRDGCNDKDFKQYQNFCFPIVHNRYAAE
LKSQHFTFMLTDIDTSRKYGFCKMIESGSSKFCYCFISEFPWFEIFYKCLNCLCTLHVRK
DSVTLNSIIEKLFKLSIPKPNDIVSLTTSLTFSVPDEAALPSIPENRNMMEYISSTNPKN
MIEIFAALMFERRVIFTSSNLSVISGCVFASESLIRPLAWQHIFIPLLHRHIVDYCTAPM
PFIIGMHSTLYKTIIDTPALEGVVVVNIDENTVFSPYDDAHKLPSEAMTYLRTQLGKPNI
SVGTNLPRVFLHTQAILFGGYRVALRFRMGETISYDEDKFITSFKAGGKRSFAEELIHLQ
SFRQFIEKRLYMLNHGIGFHDLFEREVSELQNEYDDTMTVYKEWISRASDKVLLDIKANM
KMARSSAKHGMKEVKNALKSAPKEGGKELSLSENIASLRPPRPPRPPPPKTSKTVTRFKI
IDGDEPDSINRLEPMYLDKPVRPEPTYLDKPTKSNIEELLIDLTFEKSPKSEPNSFLNTP
VSSQKLPSPSNDSWSQELFNSYDFNMSRTDEGKSVQRANGFVNDASNPAKPPSNAVPEEA
LISFD

Nucleotide sequence

Length: 1,818

>Boschl.CG.Botznik2013.chr1.g50644.01.t
GATGGAACAGTCAAAGAAACCTCCCAAGCAGGTGTATATCTGTTTCTTCATAGTTGAGCT
GCGTGAAGATGGCACGTTTACGAAGGGATGTACGTATCCCAGAGACGGGTGTAATGATAA
GGATTTCAAGCAATATCAGAACTTCTGTTTCCCTATCGTGCATAATCGATACGCGGCAGA
GTTGAAAAGTCAACATTTTACCTTCATGCTTACTGATATTGACACCAGTCGAAAATATGG
ATTTTGTAAAATGATCGAATCTGGCAGTAGCAAATTTTGCTACTGTTTCATTAGCGAATT
CCCGTGGTTTGAAATATTTTACAAATGTCTCAACTGCCTGTGCACTTTACATGTCAGAAA
AGATTCCGTGACTTTAAATTCAATCATTGAAAAATTGTTCAAATTATCTATTCCTAAACC
GAATGATATCGTATCCTTGACAACCTCATTGACGTTTTCAGTACCTGATGAAGCAGCTTT
ACCGTCAATCCCAGAAAACCGTAATATGATGGAATATATCTCTTCGACGAACCCAAAAAA
CATGATTGAGATTTTCGCGGCTTTAATGTTTGAAAGACGTGTTATATTCACCTCCTCAAA
TTTGAGTGTTATATCGGGATGTGTGTTTGCGTCTGAGAGTCTCATCCGTCCTCTGGCATG
GCAACATATCTTCATACCTTTATTACATCGACATATTGTCGATTATTGTACCGCGCCAAT
GCCGTTTATAATTGGAATGCATTCTACGTTGTACAAAACAATCATAGATACTCCTGCGTT
GGAAGGTGTTGTGGTGGTCAACATCGATGAAAATACAGTATTTTCACCGTATGACGATGC
ACACAAATTGCCAAGTGAGGCAATGACATATTTGCGTACTCAGCTCGGCAAACCGAACAT
ATCAGTCGGGACGAACTTGCCTCGTGTGTTTTTACACACTCAAGCCATACTTTTTGGTGG
CTACAGAGTCGCTTTGAGGTTCAGAATGGGCGAAACTATTTCGTACGACGAAGACAAATT
CATTACTTCGTTTAAAGCCGGAGGAAAACGGTCCTTTGCGGAAGAACTTATTCACTTGCA
ATCTTTTCGGCAATTTATCGAAAAAAGACTTTACATGTTGAACCACGGGATTGGTTTTCA
TGATTTGTTCGAGAGAGAAGTCTCCGAATTACAGAACGAGTACGACGACACTATGACTGT
ATATAAAGAATGGATTTCACGTGCAAGCGATAAAGTTTTGTTGGATATTAAAGCAAACAT
GAAGATGGCCAGGTCTTCTGCAAAGCATGGAATGAAAGAAGTGAAAAACGCTTTGAAATC
TGCCCCGAAAGAAGGTGGCAAGGAGCTTTCGTTGAGTGAAAACATTGCAAGTTTAAGACC
GCCGCGGCCTCCAAGACCACCACCACCTAAGACTTCCAAAACTGTAACCCGTTTCAAAAT
TATTGACGGTGATGAACCTGATAGTATCAATCGACTTGAGCCCATGTATCTTGATAAACC
AGTTCGACCTGAACCAACTTACCTTGACAAACCTACTAAGTCAAACATTGAAGAGCTTCT
GATTGATTTGACGTTTGAAAAGTCCCCGAAAAGTGAGCCAAACTCTTTTTTAAACACCCC
GGTTTCAAGCCAGAAGTTACCTAGCCCGAGTAACGATAGTTGGTCGCAGGAACTGTTCAA
TAGCTATGACTTTAACATGTCTCGAACAGACGAAGGCAAGTCTGTTCAGCGCGCGAACGG
TTTTGTTAATGACGCCAGTAATCCTGCCAAGCCGCCATCTAATGCAGTCCCAGAAGAGGC
GCTTATTTCTTTTGATTG

InterProScan

ProSiteProfiles
Tripartite_DENN (IPR037516) - T[1-376] 44.789
Pfam
uDENN_dom (IPR005113) - T[32-83] 1.5E-7
SMART
cDENN_dom (IPR001194) - T[89-271] 4.8E-54
Pfam
cDENN_dom (IPR001194) - T[91-271] 1.6E-44
SMART
dDENN_dom (IPR005112) - T[302-369] 2.5E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEN1A_HUMAN 38.663 % 343 1.29E-106
DEN1B_HUMAN 35.666 % 311 3.02E-96
DEN1C_HUMAN 35.111 % 301 3.36E-92





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