Aniseed - Transcript Card

Clone 'cign005m21' >
Clone 'cien158897' >
Clone 'cien108737' >
Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr1.g02110.01.t

Possible name(s)

RPL27A

Gene model

Boschl.CG.Botznik2013.chr1.g02110

Location

chr1 [6,454,072 / 6,456,384]

Sequences

Amino acid sequence

Length: 147

>Boschl.CG.Botznik2013.chr1.g02110.01.p
MVSRFKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRT
FNLNRSKQYCPIINLDRLWSLVTEQTRLHYKEKTDVAPVIDCIRAGYFKVLGKGILPKQP
VIVKARFFSRRAEEKIKKVGGTCVLVA

Nucleotide sequence

Length: 444

>Boschl.CG.Botznik2013.chr1.g02110.01.t
TGGTCTCCAGGTTCAAGAAGACTCGCAAGTTGCGTGGACATGTAAGTCATGGTCATGGAC
GTGTCGGCAAACACCGAAAGCATCCTGGTGGTCGCGGTAATGCTGGTGGCCAGCATCATC
ACCGAATCAACTTCGACAAATAGCATCCGGGTTATTTCGGTAAAGTTGGTATGAGAACAT
TCAACTTGAACCGCAGTAAGCAATACTGCCCCATCATCAATCTTGATAGACTCTGGTCAC
TCGTTACGGAGCAAACTAGGCTGCATTACAAGGAAAAAACTGACGTAGCACCTGTCATCG
ATTGCATTCGTGCTGGTTACTTTAAAGTTCTCGGCAAAGGTATTCTCCCCAAACAACCAG
TGATCGTGAAAGCAAGATTTTTCAGCAGAAGAGCTGAGGAGAAAATAAAGAAGGTTGGAG
GGACCTGTGTTCTTGTTGCATGAA

InterProScan

Hamap	Ribosomal_L15 (IPR030878) - T[1-146] 11.746
SUPERFAMILY	L18e/L15P_sf (IPR036227) - T[6-146] 9.16E-43
Pfam	Ribosomal_L18e/L15P (IPR021131) - T[28-144] 7.0E-25
ProSitePatterns	Ribosomal_L15_CS (IPR001196) - T[109-140] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL27A_HUMAN	76.351 %	240	5.32E-83