- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr13.g50464.01.t
Possible name(s)
MALRD1; MAMDC2; MDGA2
Gene model
Location
chr13 [6,659,964 / 6,661,298]
Amino acid sequence
Length: 208
>Boschl.CG.Botznik2013.chr13.g50464.01.p
MDIYLSERPGTNEHPLTCDFTTTTCQWQQAKGKNKDFDWDLATSSTTHLDGTGPRSDHTS
GSRDGYIFIDASRRKIGSRASLVSRQFKIDGPKCFRFWYHMHGTGIGDLTIFKLIKKKMV
NIWRTKGEKGSQWLEGMIDLQGNHIFSLVITATRGSDWKGDIALDDFIITDGKCREFIQS
TSSIVRNKPIHFVPVDQLGTVLTFMELS
Nucleotide sequence
Length: 627
>Boschl.CG.Botznik2013.chr13.g50464.01.t
TGGACATTTATCTTTCAGAAAGGCCAGGGACAAATGAGCATCCGCTGACATGTGACTTTA
CCACAACCACATGTCAATGGCAGCAGGCCAAGGGAAAAAACAAAGACTTTGATTGGGATC
TCGCCACATCCTCAACGACTCATCTAGATGGCACGGGTCCCAGATCCGACCACACGTCAG
GCAGTAGGGATGGCTATATATTTATCGATGCTTCAAGACGCAAAATCGGTTCGCGTGCAA
GTTTGGTCAGCAGACAATTCAAAATTGATGGTCCGAAATGCTTTCGATTTTGGTACCATA
TGCACGGTACAGGCATCGGAGACTTGACAATATTCAAACTCATTAAAAAGAAGATGGTAA
ATATTTGGAGAACCAAAGGCGAAAAGGGAAGTCAATGGCTTGAGGGAATGATCGATTTGC
AAGGCAATCACATATTTTCGTTGGTGATAACTGCAACAAGAGGATCCGACTGGAAAGGAG
ATATCGCCTTAGATGACTTCATCATAACCGACGGAAAATGTCGTGAGTTTATACAATCTA
CGTCTAGCATTGTGCGCAACAAACCTATCCACTTCGTTCCAGTTGATCAATTAGGAACTG
TTCTGACTTTTATGGAGCTTTCGTAGC
| SMART |
MAM_dom (IPR000998) - T[13-176] 2.0E-27 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[14-174] 2.69E-35 |
| ProSiteProfiles |
MAM_dom (IPR000998) - T[16-176] 30.677 |
| Pfam |
MAM_dom (IPR000998) - T[18-175] 1.3E-33 |
| CDD |
MAM_dom (IPR000998) - T[18-174] 1.49643E-35 |
| PRINTS |
MAM_dom (IPR000998) - T[66-82] 1.3E-5 - T[93-104] 1.3E-5 - T[157-170] 1.3E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MDGA2_HUMAN | 35.897 % | 93.2 | 3.96E-22 |
| MAMC2_HUMAN | 31.395 % | 93.2 | 4.42E-22 |
| MALR1_HUMAN | 32.418 % | 84.7 | 3.95E-19 |
