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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.151.v1....' > 
  2. Transcript 'Boleac.CG.SB_v3.S382...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr13.g08173.01.t

Possible name(s)

AC129492.3; VAMP2; VAMP3

Gene model

Boschl.CG.Botznik2013.chr13.g08173

Location

chr13 [11,618,494 / 11,623,668]

Sequences

Amino acid sequence

Length: 119

>Boschl.CG.Botznik2013.chr13.g08173.01.p
MANYQAIPNERSYGGTDGSGPSGTSSKKLQQTQAQVDEVVDIMRTNVDKVLERDQKLSEL
DDRADALQQGASQFETQAAKLKRKYWWKNCKMWAILIVVILAILIIIIVSVVGGNGGGE

Nucleotide sequence

Length: 360

>Boschl.CG.Botznik2013.chr13.g08173.01.t
AATGGCTAACTATCAGGCTATCCCCAACGAAAGGTCATATGGAGGCACTGATGGAAGTGG
TCCTTCTGGGACCAGCAGCAAAAAATTGCAGCAAACGCAAGCACAGGTTGACGAGGTCGT
GGACATCATGAGGACCAATGTCGACAAAGTGTTAGAAAGAGATCAAAAATTGTCAGAATT
AGACGACAGAGCAGATGCACTGCAGCAAGGCGCGTCACAGTTCGAAACACAAGCTGCTAA
GCTAAAGAGAAAGTATTGGTGGAAGAACTGCAAGATGTGGGCCATATTGATCGTTGTTAT
ATTAGCTATTCTCATAATTATCATAGTATCTGTGGTTGGTGGGAACGGTGGTGGGGAATG

InterProScan

Pfam
Synaptobrevin (IPR001388) - T[26-112] 4.5E-36
ProSiteProfiles
Synaptobrevin (IPR001388) - T[28-88] 18.848
PRINTS
Synaptobrevin (IPR001388) - T[33-52] 4.2E-30 - T[53-72] 4.2E-30 - T[89-108] 4.2E-30
ProSitePatterns
Synaptobrevin (IPR001388) - T[46-65] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VAMP3_HUMAN 82.5 % 136 3.24E-43
VAMP2_HUMAN 87.671 % 130 8.83E-41
VAMP1_HUMAN 68.367 % 129 4.58E-40