- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr13.g07701.01.t
Possible name(s)
AP4B1; COPG1; COPG2
Gene model
Location
chr13 [11,527,397 / 11,529,992]
Amino acid sequence
Length: 864
>Boschl.CG.Botznik2013.chr13.g07701.01.p
MRRDKKDDELGGVNPFSSMDRSAVLQEARVFHQTPINARRCCEILTKILYLINKGENFTT
NEATDTFFAMTKLFQCNDVVMRRMCYLTIKAMANMTENAFIVTQSLTKDMNGREDMFRAA
AVRALCAITDVSTLQGIERYMKQAIVDKVHSVSSAALVSSSHLANKAPDVVKRWANEAQE
ACMSDNIMVQYHALGLLYYLRKSDRLGTSKMVTKLMKGGLKSPFAYCLLIRIASKLLEEN
DAGHDSPLFDFIEGCLRNKNEIVIYEAASAIVNMPNCTARELAPAVSVLQLFLSSPKASF
RYAGVRTLNKVAIKHPSAVIACNLDLENLITDVNRSIATLAITTLLKTGTESSVDRLMKQ
ISSFMSEISEEFKVVVVQAISALCQKYPRQHSTMMNYLSSMLRDGGFDYQKSIVDCIISI
IEESPESKEVGLEHLCEFIEDCEHTVLATKIINLLGAEGPATSNPSKYIRFIYNRIILEN
EAVRAAAVTALAKFGASSDELLASVLILLGRSMLDDDDEVRDRATFFYNILLQKDKKLNT
TYILSGLIVPIPSLEQCLNQYTKELPDEPFSLKMVPLTTAPAKRDQEKKATINEKPKASR
QEIYAEQLSRITEFSILGPLFKSSKPVELTEPETEYVISCVKHTFEKHMVFQFDCVNTLN
DQVLEDVTVQIEPSDGFDVIAYVPCPVLKYNEPGITYACVSVPDDDDAEVTTTLGCTMKA
MIKDCDPNTSETDEEGYEESYQIEDIDVTVADHVQKTLKSNFSAAWDELEDGFELEETYA
LSSMKTLQEAVQNITKYLGMQACERSDKVPEGKSSHTLYLSGTYRGGFEVLARARLVLRD
GVTMQLTVRSNGEIAAQVILSAVS
Nucleotide sequence
Length: 2,595
>Boschl.CG.Botznik2013.chr13.g07701.01.t
TGCGACGTGACAAGAAAGACGATGAACTGGGTGGTGTTAATCCATTCTCATCGATGGATC
GGTCTGCGGTTTTACAAGAGGCCAGGGTATTTCATCAAACTCCAATCAATGCAAGAAGAT
GTTGTGAAATTCTAACGAAAATTCTATATCTGATTAACAAGGGTGAAAATTTCACGACAA
ATGAAGCGACCGACACATTCTTTGCAATGACCAAGTTATTTCAATGCAATGATGTTGTAA
TGAGACGAATGTGCTATTTGACCATCAAAGCAATGGCAAATATGACCGAAAATGCTTTTA
TTGTGACACAAAGTTTGACCAAGGACATGAACGGCAGAGAAGATATGTTCAGGGCAGCTG
CTGTGAGGGCGCTATGCGCCATCACTGATGTAAGCACGTTGCAAGGGATCGAGCGTTACA
TGAAGCAGGCAATCGTGGATAAAGTGCATTCTGTATCAAGTGCTGCTCTAGTTTCATCCA
GTCATTTAGCCAATAAAGCTCCTGATGTTGTCAAAAGATGGGCAAATGAGGCACAAGAGG
CTTGCATGAGTGACAATATCATGGTGCAATATCACGCCCTCGGTTTGCTGTACTACTTGA
GAAAAAGTGACCGACTGGGGACGTCGAAAATGGTGACCAAATTGATGAAAGGTGGACTGA
AGTCCCCGTTTGCGTACTGCCTGCTGATCCGCATCGCTAGTAAATTGCTGGAGGAAAATG
ACGCGGGCCATGACAGCCCACTTTTTGATTTCATAGAGGGATGTCTTCGAAACAAAAATG
AAATTGTTATCTATGAAGCGGCGTCTGCTATCGTCAATATGCCAAATTGTACGGCCCGTG
AATTAGCCCCTGCTGTTTCCGTTCTTCAGCTATTCTTGAGCTCGCCGAAAGCATCGTTTC
GTTACGCAGGTGTGAGAACGTTGAATAAAGTTGCTATCAAACATCCGTCTGCTGTTATAG
CGTGCAACCTCGATTTGGAAAATCTCATTACCGATGTAAATCGCAGCATTGCGACATTGG
CGATTACAACGCTTTTGAAAACCGGCACCGAAAGCAGTGTTGACAGGCTGATGAAACAGA
TTAGCTCCTTCATGTCTGAGATTTCGGAAGAATTCAAAGTCGTGGTGGTTCAGGCTATTT
CTGCTCTTTGCCAAAAGTACCCCCGGCAGCATTCTACTATGATGAATTACCTTTCTTCTA
TGTTACGAGACGGTGGGTTTGACTACCAAAAATCGATCGTCGATTGCATCATTAGCATCA
TAGAAGAAAGCCCAGAATCGAAAGAGGTGGGATTGGAACATCTTTGTGAATTCATCGAGG
ATTGTGAACATACCGTGCTGGCAACGAAAATCATCAATCTTCTTGGAGCAGAGGGGCCCG
CGACCAGTAACCCGTCGAAATACATCAGGTTCATATACAACCGTATTATTCTGGAGAATG
AAGCGGTGCGGGCTGCGGCTGTTACTGCGCTCGCTAAATTTGGGGCGAGTTCCGATGAGC
TTTTGGCCAGTGTGCTTATACTTCTGGGACGATCCATGCTCGATGACGATGATGAAGTGA
GAGATAGAGCCACGTTTTTCTACAATATTTTGCTGCAGAAGGACAAGAAATTGAATACGA
CGTACATTTTGAGCGGACTTATCGTGCCGATCCCTTCGTTAGAACAATGTCTGAATCAGT
ACACGAAAGAATTGCCGGATGAGCCGTTCAGCTTGAAGATGGTGCCGCTGACGACAGCCC
CTGCTAAACGTGATCAGGAGAAGAAAGCTACTATCAACGAAAAGCCGAAAGCGTCGAGAC
AAGAGATTTACGCAGAACAGCTGTCTCGCATCACAGAGTTTTCAATACTGGGGCCGCTTT
TCAAATCGTCAAAACCAGTCGAGCTTACAGAGCCTGAAACGGAATACGTGATATCTTGTG
TGAAACACACGTTCGAAAAGCATATGGTGTTTCAGTTTGACTGCGTCAACACGTTGAACG
ACCAAGTCTTGGAGGATGTAACGGTGCAGATTGAGCCAAGCGACGGATTTGACGTGATCG
CGTACGTCCCTTGTCCCGTGCTCAAATATAACGAGCCTGGAATTACATATGCTTGTGTGT
CGGTTCCTGATGACGACGACGCAGAAGTAACCACGACTCTCGGCTGCACGATGAAGGCGA
TGATCAAGGACTGCGATCCTAACACGTCCGAAACAGACGAGGAAGGATACGAAGAAAGTT
ATCAGATAGAAGATATTGACGTCACTGTCGCTGACCACGTGCAAAAAACGTTGAAGTCTA
ATTTCAGCGCAGCCTGGGATGAATTGGAGGACGGTTTTGAATTGGAAGAGACATACGCGC
TATCGTCGATGAAGACGTTGCAGGAAGCGGTGCAGAATATTACAAAATACCTCGGAATGC
AAGCGTGCGAGAGGTCGGACAAGGTCCCGGAAGGAAAGTCATCTCACACGCTGTATCTAT
CGGGGACGTACCGGGGCGGATTTGAAGTACTGGCCAGGGCCAGGCTTGTGCTCAGAGACG
GAGTGACGATGCAATTGACTGTGCGTAGCAATGGAGAGATTGCTGCGCAAGTTATATTAT
CCGCGGTGTCTTGAG
| PIRSF |
Coatomer_gsu (IPR017106) - T[1-864] 0.0 |
| PANTHER |
Coatomer_gsu (IPR017106) - T[3-863] 0.0 |
| Gene3D |
ARM-like (IPR011989) - T[17-308] 1.3E-101 - T[319-525] 1.2E-6 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[23-550] 7.85E-87 |
| Pfam |
Clathrin/coatomer_adapt-like_N (IPR002553) - T[25-533] 2.0E-116 |
| SUPERFAMILY |
Clathrin_app_Ig-like_sf (IPR013041) - T[593-752] 2.56E-54 |
| Gene3D |
Coatomer_gsu_app_sf (IPR037067) - T[593-749] 1.8E-61 |
| Pfam |
Coatomer_gsu_app_Ig-like_dom (IPR013040) - T[603-749] 7.9E-56 |
| Gene3D |
TBP_dom_sf (IPR012295) - T[750-864] 5.4E-46 |
| Pfam |
Coatomer_g_Cpla (IPR032154) - T[751-863] 1.0E-39 |
| SUPERFAMILY |
Coatomer/calthrin_app_sub_C (IPR009028) - T[753-863] 1.1E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COPG2_HUMAN | 67.436 % | 1218 | 0 |
| COPG1_HUMAN | 66.974 % | 1193 | 0 |