- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr13.g00065.01.t
Possible name(s)
ADAMTS10; ADAMTS18; ADAMTS6
Gene model
Location
chr13 [10,320,316 / 10,327,049]
Amino acid sequence
Length: 1,039
>Boschl.CG.Botznik2013.chr13.g00065.01.p
MKALSSLTEEDASSPVETRFLRRVDAKGTFMSYVNIESINRGYNKDFVKLRRRRSVTESL
TPQTDDHEVFIEMDNMFDMPKPRFHLKKNYKLVSKNFQLEIRGRGGKIVTRHDEIDDCHY
TGTIHNYDGYSKVALSLCDGMQGVIAKDGVEYVIEPLFNETSSASNDTDDSLVESTTSVP
FSEAEAMSEERAEGHPHVIYKRSIFRHLHQRKKSKDDLGHCGYSDDANGETPWWRVKPQG
GDSKTRQGERHGSDPSSSQNKRGSKKSRRNSRHHHHEKHITESNDLEEETLSRKKRSVSR
ERNVETLVVADKMMVGYHGRKDVESYILTIMNIVSNLYHDASIGNAVNIIVTRIVLLTED
QPNLKINHHADRSLDSFCRWQHSINVNDSVEAPESGIAHHDNAVLLTGYDICTFQNKPCG
TLGLAPVSGMCEQGRSCNINEDIGLASAFTIAHEMGHNFGMEHDGNGNDCGMGSGEPAEI
MAAQYSKNSRPFTWSRCSRSYITEFLDTGSGECLRGGPPRRDFQFPEELPGQQHSADEQC
RFQYGPQSRQCNYGWCYQGRCEPYGQRPNSVDGGWGQWSEWSECSRTCGGGASSSYRQCN
NPEPQNGGKYCTGQRRRYHTCNAQACNATTKSFREQQCAQFDADPFQGKYYNWRPFVGGH
NVNPCALNCLAEGYSFYTERAKAVVDGTRCFADSMDMCINGDCHHVGCDGVLHSEAVEDK
CRVCGGDGSTCETVNGVFQSPGMQGLYEEIAMIPKGAVHIHISEVLVSQQNYLALRSRSG
DNYLNGGYTIDWAQKFDAAGTTFTYGRDESDPEFLKALGPTTEDLVVLVLLQETNKGIRY
EYNVPVEHPSSGDYDVQFVWSMGEWSECSATCAGGTRRRMVICQRATDGSQVQHSYCDQS
TMPSEEIGNCNIEPCGPEWYIGEWQSCSATCGGGQRIRVVNCQRKISQSEDEVVANKFCP
GETPVSTENCNLDVCPPQWVARTWTQVLHLTVRVYNYNASPSFRDSHYFRFGDIGRGFLQ
TQLKNSLHSFVAHFSSDNR
Nucleotide sequence
Length: 3,120
>Boschl.CG.Botznik2013.chr13.g00065.01.t
TGAAAGCGCTATCATCACTAACAGAAGAGGACGCTTCTTCGCCGGTCGAGACGCGGTTTC
TTCGTCGCGTTGACGCAAAAGGAACATTTATGTCCTACGTGAACATTGAATCAATTAACC
GCGGATATAATAAAGACTTTGTCAAACTTCGGCGGCGTAGGAGCGTCACGGAGTCATTGA
CCCCGCAAACAGACGATCACGAAGTCTTTATTGAAATGGACAATATGTTTGATATGCCGA
AGCCGCGGTTCCATTTAAAAAAGAATTATAAGCTAGTTTCGAAGAACTTCCAATTGGAAA
TTAGAGGCAGGGGAGGCAAAATCGTCACGCGGCACGACGAAATAGACGATTGCCACTACA
CGGGAACTATACATAACTACGACGGATATTCTAAAGTGGCGCTTAGTTTGTGTGACGGAA
TGGAAGGCGTCATAGCGAAAGACGGGGTCGAATATGTAATTGAACCTCTGTTCAATGAAA
CATCTTCGGCTTCGAACGACACGGACGACAGCTTAGTCGAGTCGACTACCTCCGTCCCGT
TTTCGGAAGCGGAAGCGATGAGCGAAGAGAGGGCAGAAGGTCACCCGCACGTGATTTACA
AAAGATCCATCTTCCGTCATCTTCATCAAAGAAAAAAGAGCAAAGACGATCTCGGACACT
GTGGTTACTCGGGTGACGCGAACGGAGAAACACCTTGGTGGAGAGTCAAACCGCAAGGTG
GCGATTCAAAGACACGACAGGGCGAGCGTCACGGATCCGATCCATCATCATCGCAAAACA
AGCGCGGCTCGAAAAAATCCAGGAGGAATTCAAGACATCACCATCACGAGAAGCATATCA
CAGAGAGCAACGACCTCGAGGAAGAAACTCTCAGTCGCAAAAAACGATCCGTCAGTCGGG
AAAGAAACGTTGAAACGCTAGTCGTGGCCGACAAGATGATGGTCGGATACCACGGACGAA
AAGACGTAGAAAGCTACATACTCACAATAATGAATATCGTATCCAATCTGTACCATGATG
CATCGATCGGTAACGCGGTGAACATCATTGTGACCAGAATAGTCTTGCTAACGGAAGATC
AGGCCAACCTCAAGATAAACCACCACGCCGATAGATCGCTGGACAGCTTTTGCAGATGGC
AGCATTCTATCAACGTAAACGATTCGGTAGAGGCTCCAGAGAGTGGAATAGCGCACCATG
ACAATGCTGTTCTACTTACCGGGTACGACATCTGCACGTTCCAGAACAAGCCTTGCGGAA
CTCTAGGTCTCGCGCCAGTATCGGGCATGTGCGAACAAGGCAGAAGTTGTAATATCAACG
AAGATATTGGACTTGCTTCCGCCTTCACAATAGCCCACGAAATGGGACACAAGTTCGGTA
TGGAACACGACGGGAATGGAAATGACTGTGGAATGGGCAGCGGCGAACCCGCGGAAATCA
TGGCAGCACAATATTCCAAGAACTCAAGGCCTTTCACGTGGTCACGGTGCTCCAGATCAT
ACATCACCGAGTTTTTAGAGACCGGGTCTGGTGAATGCTTAAGAGGCGGTCCCCCACGAC
GAGACTTTCAATTTCCCGAGGAATTGCCCGGACAGCAACACAGTGCCGACGAACAATGCC
GATTTCAATACGGCCCTCAGTCTCGTCAATGCAATTACGGAGGGTGCTATCAAGGTCGTT
GCGAGCCCTATGGTCAGCGTCCCAATTCCGTAGATGGCGGTTGGGGACAGTGGAGTGAAT
GGAGCGAATGTTCAAGAACATGCGGCGGCGGAGCTAGCTCGTCGTACCGTCAATGCAATA
ACCCGGAACCTCAAAACGGTGGGAAATATTGCACCGGTCAAAGGCGACGGTATCATACTT
GCAATGCACAGGCCTGCAACGCCACTACCAAGTCTTTCCGTGAGCAGCAATGCGCGCAAT
TCGACGCGGATCCGTTTCAAGGCAAATATTACAACTGGAGGCCTTTTGTGGGTGGACACA
ACGTGAATCCGTGTGCACTCAACTGCTTAGCGGAAGGTTACAGCTTCTACACCGAACGTG
CCAAGGCTGTGGTTGACGGCACTCGCTGCTTCGCGGATAGCATGGATATGTGCATCAACG
GAGACTGCCATGACGTTGGTTGTGACGGAGTGCTGCATTCGGAAGCGGTCGAAGACAAAT
GCCGCGTCTGCGGCGGAGACGGGAGCACTTGCGAGACGGTTAACGGCGTGTTCCAATCGC
CCGGGATGCAAGGACGGTATGAAGAAATTGCGATGATACCGAAAGGCGCAGTTCACATTC
ACATCAGCGAAGTGTTGGTTTCTCAACAGAACTATCTCGGGTTACGAAGCCGGAGCGGGG
ATAATTATCTAAACGGCGGCTACACCATCGATTGGGCGCAAAAGTTTGATGCTGCTGGTA
CGACATTCACGTACGGAAGAGACGAATCCGACCCGGAGTTTTTGAAAGCACTCGGCCCTA
CAACCGAAGATTTAGTAGTCCTGGTACTTCTACAAGAAACCAACAAAGGAATTCGTTACG
AATACAATGTTCCAGTGGAACACCCCAGCAGCGGCGATTACGACGTGCAATTCGTATGGA
GCATGGGAGAATGGTCTGAATGTTCCGCCACCTGTGCTGGCGGCACTCGCCGTCGAATGG
TAATTTGCCAACGCGCTACTGACGGCAGTCAAGTACAACACAGTTACTGTGATCAAAGCA
CCATGCCTTCCGAAGAGATAGGAAACTGCAACATCGAGCCTTGCGGGCCAGAGTGGTATA
TCGGCGAATGGCAGTCTTGCAGCGCGACTTGCGGCGGTGGGCAAAGAATTCGTGTTGTCA
ACTGTCAACGAAAAATATCGCAGTCTGAAGACGAAGTTGTTGCGAACAAATTCTGCCCTG
GAGAGACTCCCGTTTCGACGGAGAACTGCAACCTGGACGTGTGTCCCCCGCAATGGGTGG
CGCGAACGTGGACTCAGGTACTACACCTTACAGTGCGTGTATATAACTATAACGCGTCCC
CATCATTCCGCGATTCTCATTACTTCCGATTCGGAGATATCGGTAGAGGTTTTCTTCAAA
CCCAACTCAAGAATAGCCTACATTCGTTCGTCGCTCATTTTAGTTCTGACAATCGCTGAA
| Pfam |
Peptidase_M12B_N (IPR002870) - T[22-200] 9.5E-23 |
| Gene3D |
MetalloPept_cat_dom_sf (IPR024079) - T[297-538] 2.4E-90 |
| ProSiteProfiles |
Peptidase_M12B (IPR001590) - T[302-518] 22.402 |
| Pfam |
Peptidase_M12B (IPR001590) - T[304-516] 1.2E-21 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[569-626] 3.53E-14 - T[859-915] 1.44E-10 - T[918-975] 3.27E-11 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[570-626] 6.5E-18 - T[859-915] 1.5E-9 - T[917-976] 5.5E-10 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[572-627] 13.894 - T[856-914] 9.846 - T[915-976] 11.732 |
| SMART |
TSP1_rpt (IPR000884) - T[575-627] 4.7E-14 - T[859-916] 5.8E-6 - T[919-976] 2.4E-5 |
| Pfam |
TSP1_rpt (IPR000884) - T[577-626] 5.1E-10 - T[863-915] 0.0016 - T[922-975] 1.7E-5 |
| Pfam |
ADAM_spacer1 (IPR010294) - T[733-845] 2.2E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATS6_HUMAN | 51.392 % | 997 | 0 |
| ATS18_HUMAN | 38.356 % | 642 | 0 |
| ATS10_HUMAN | 43.796 % | 789 | 0 |
