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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr12.g29748.01.t

Possible name(s)

SAMD8; SGMS1; SGMS2

Gene model

Boschl.CG.Botznik2013.chr12.g29748

Location

chr12 [16,530,427 / 16,533,269]

Sequences

Amino acid sequence

Length: 214

>Boschl.CG.Botznik2013.chr12.g29748.01.p
MELPGDAATWTKTQVGIWLKSVGFESFTQLLCGEHEIDGKALLALTENDLRSPPLELKKL
GHIKKLNLSLQDLHSRQANHCGTIRTNGYLVPPPRTRRRLRNVRQQQYTDDSCMSDSSDA
SDRADGRLRQDRVFNPEYKKMLISFLYSIVAAFATSFTMVLVHDRVPDKTRHPPLPDIFL
DNIPLIPYAFKFSEYCGVSLMAIWICILVLHKHR

Nucleotide sequence

Length: 645

>Boschl.CG.Botznik2013.chr12.g29748.01.t
TGGAGCTACCTGGCGATGCCGCGACCTGGACCAAGACCCAAGTGGGAATATGGCTTAAAA
GTGTTGGATTTGAAAGTTTTACCCAGCTCCTTTGCGGCGAACATGAAATTGATGGCAAAG
CTCTACTAGCACTAACGGAAAATGATCTCCGTTCTCCACCGCTGGAACTTAAGAAACTGG
GACACATCAAGAAACTGAACTTATCCCTTCAAGATCTTCACTCGAGACAAGCAAATCACT
GTGGTACCATTCGTACAAATGGATATTTAGTGCCTCCACCCCGAACTAGAAGGCGCCTGC
GAAATGTTAGACAACAGCAATACACTGACGATTCATGCATGAGTGATTCCAGCGACGCAA
GTGACCGTGCGGACGGACGCTTGAGGCAAGATCGAGTCTTCAATCCAGAGTATAAGAAAA
TGCTGGTCAGCTTCTTGTATTCCATCGTAGCTGCTTTCGCGACATCATTCACGATGGTCC
TCGTGCACGATCGGGTCCCCGACAAAACCAGGCACCCACCCTTACCTGATATATTTTTGG
ATAATATACCTTTGATACCGTATGCCTTCAAGTTTTCCGAGTACTGTGGCGTTTCTCTCA
TGGCTATTTGGATTTGTATACTCGTGTTACACAAACATAGGTGAA

InterProScan

SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[4-75] 6.86E-15
SMART
SAM (IPR001660) - T[7-76] 7.7E-6
Pfam
SAM (IPR001660) - T[9-73] 5.9E-13
ProSiteProfiles
SAM (IPR001660) - T[10-76] 13.972

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SAMD8_HUMAN 41.014 % 165 2.99E-49