- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g29585.01.t
Possible name(s)
KDM5A
Gene model
Location
chr12 [16,488,989 / 16,490,594]
Amino acid sequence
Length: 534
>Boschl.CG.Botznik2013.chr12.g29585.01.p
MGSVEELKTYVHHVVRLFNMKSDVLAEESWQWLKNKLDLSYVFIADEVPGHVADDVSDDI
SDNVFEEVEIKNPFTVIFNQCMNNALLSINGDTDIVTNAFYCPELVNGFLKKLFSKISLW
SCLVTGDLGRFGNTACYAAYSSQFNELSNWKFQNITTNNKTQGIMEKNQQELKRARLENR
RYKRLDEIATKYHSLNEALLREFKESLMYSKRTFKKEVTEKWKKRHRHSLPNKLIGKYSQ
KPTKWLRGPCMTNKTNKKTCTNEVQITGYVAPPGLTARFGILNKTPILTSMLEEDYKILE
SERNWLNTVHIDTSMQILKKMYPDIDGLQASNAFISTDSAIYTPKDKFIQIINVHQNTHW
VTVSNIFSPPYNFESVDVFDSAPATYDEFDIFQITKMLRPKEDKVEINFPRVQTQTAGSG
NCGAFSIVYAEALCRGKNPTTSFVNETNIRGLIAMGLRQKTLINLSSEITKRVEEGHETL
SINLYCKCRLSNYGAYIQCSNCDKWYHPACSKNRIPEDVQASEWKCEECTGQEQ
Nucleotide sequence
Length: 1,605
>Boschl.CG.Botznik2013.chr12.g29585.01.t
AATGGGATCTGTGGAGGAGTTGAAAACATATGTCCACCACGTAGTTCGTCTTTTTAACAT
GAAGTCCGACGTCCTGGCTGAGGAGAGCTGGCAATGGCTGAAAAATAAGTTGGATTTGTC
GTACGTATTCATTGCCGATGAAGTTCCTGGTCACGTTGCTGATGATGTATCCGATGATAT
TTCCGATAATGTCTTTGAGGAGGTGGAAATAAAGAATCCATTTACCGTCATTTTCAATCA
ATGTATGAATAATGCGTTGTTGTCCATAAATGGCGATACGGATATTGTAACAAATGCATT
TTACTGTCCAGAACTGGTGAATGGATTTTTAAAGAAGCTCTTTTCAAAAATTTCATTATG
GTCCTGTTTGGTCACGGGGGATCTTGGTCGATTTGGAAATACCGCCTGCTATGCAGCATA
TTCATCTCAATTCAACGAACTTTCAAATTGGAAGTTTCAGAACATCACCACCAACAACAA
AACTCAGGGGATAATGGAAAAAAACCAACAGGAATTAAAACGAGCTCGCTTGGAGAACCG
CCGCTACAAACGTCTTGACGAGATTGCCACAAAATATCACTCTCTTAATGAGGCATTGTT
GAGAGAATTTAAAGAGAGTTTGATGTATTCAAAACGAACGTTCAAAAAAGAAGTAACCGA
AAAATGGAAAAAGAGGCACAGGCATTCACTGCCAAACAAGTTAATTGGGAAATACTCTCA
GAAACCCACAAAGTGGCTCAGGGGTCCATGCATGACAAACAAAACCAACAAAAAAACTTG
CACGAACGAAGTTCAAATCACCGGATATGTTGCTCCACCAGGCTTGACAGCAAGATTTGG
TATCCTAAATAAAACCCCAATACTTACAAGTATGTTGGAAGAAGACTACAAAATTTTGGA
AAGCGAAAGGAATTGGCTAAACACAGTGCATATTGACACATCAATGCAAATATTAAAAAA
GATGTATCCGGACATTGATGGCCTTCAGGCTTCCAACGCTTTCATTTCAACGGACTCTGC
TATCTATACACCAAAAGACAAGTTCATCCAAATTATCAACGTGCATCAGAATACTCACTG
GGTCACCGTTTCAAATATCTTTTCACCTCCATATAATTTCGAATCAGTCGATGTTTTTGA
TAGTGCTCCTGCCACGTATGACGAATTCGATATTTTCCAAATAACGAAAATGCTTAGGCC
AAAGGAAGACAAAGTCGAAATCAACTTTCCACGCGTTCAGACGCAGACTGCGGGCTCAGG
TAATTGTGGGGCATTTTCAATAGTTTATGCAGAAGCCCTATGCCGCGGAAAAAATCCCAC
AACTTCCTTTGTCAATGAAACGAATATACGTGGATTAATTGCAATGGGCTTGAGGCAGAA
AACTCTGATCAATTTGTCCTCGGAAATAACTAAACGGGTCGAAGAGGGTCACGAAACACT
ATCAATCAACTTGTACTGCAAGTGCAGACTCTCCAACTACGGTGCATATATTCAATGTTC
CAATTGCGACAAGTGGTATCATCCAGCATGCAGTAAAAATAGGATACCGGAAGACGTTCA
AGCATCTGAGTGGAAATGCGAGGAATGCACAGGCCAAGAACAATG
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[456-534] 6.2E-10 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[471-530] 3.77E-12 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[483-532] 8.814 |
| SMART |
Znf_PHD (IPR001965) - T[485-530] 4.0E-9 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[486-529] . |
| Pfam |
Znf_PHD-finger (IPR019787) - T[486-530] 5.9E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|