- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g21853.01.t
Possible name(s)
RASSF1; RASSF3; RASSF5
Gene model
Location
chr12 [15,304,066 / 15,307,405]
Amino acid sequence
Length: 262
>Boschl.CG.Botznik2013.chr12.g21853.01.p
MMVCHGKCALTVSLTCEADEVRPNSSIDPTWYKTIVEETKDQETLKEYNTIQRVMPQGEL
KERIDNFNKTVKSTQQMTLQEDGETFRGFIRVTMNLTRPVSVGSDAKEKERKKVQRNDSF
YVNKGAIKALYLSSGTTAEEVIGALLQKYGIKDNPLKFALFEKQVREEGHIILRKMMVRE
RPLFLRLLWGDGNSQQHAFILQENETREIQWESFSLAELYTFLKILEKEQNDHIACIKTK
YDCKRQDLVNAMDYQKKKGAVK
Nucleotide sequence
Length: 789
>Boschl.CG.Botznik2013.chr12.g21853.01.t
TATGATGGTTTGTCACGGCAAGTGCGCCCTCACCGTGTCGCTGACTTGCGAGGCGGACGA
AGTCCGTCCGAATTCGTCCATCGATCCCACGTGGTACAAGACCATCGTTGAAGAAACAAA
AGACCAGGAAACGTTGAAGGAATACAACACAATACAGCGAGTTATGCCGCAGGGAGAACT
GAAGGAGAGGATCGACAACTTCAATAAAACCGTCAAAAGTACGCAACAGATGACTTTGCA
AGAAGATGGAGAGACATTTCGTGGATTTATTCGTGTCACGATGAACCTCACCAGGCCTGT
CAGCGTCGGGTCAGACGCGAAAGAGAAAGAGCGAAAAAAAGTTCAACGAAACGATTCCTT
CTACGTTAATAAGGGTGCGATTAAAGCTCTTTATTTGAGCTCAGGCACAACCGCCGAGGA
AGTGATAGGCGCTCTTCTGCAAAAGTACGGCATCAAGGACAACCCTCTGAAGTTTGCGCT
CTTCGAGAAACAAGTTCGCGAAGAAGGGCACGTCATTTTACGTAAAATGATGGTTCGCGA
GCGTCCTCTCTTCCTGCGACTGTTGTGGGGCGACGGAAACAGCCAGCAGCACGCTTTCAT
TTTGCAGGAGAACGAAACGAGAGAAATACAGTGGGAATCCTTCTCCCTCGCCGAACTCTA
CACGTTCCTGAAGATCTTGGAAAAAGAACAAAACGACCACATCGCCTGCATCAAAACCAA
ATACGACTGTAAGCGGCAGGATCTCGTGAACGCGATGGATTATCAGAAGAAGAAGGGCGC
CGTCAAATG
| PANTHER |
C-RASSF (IPR033614) - T[4-254] 3.8E-62 |
| SMART |
RA_dom (IPR000159) - T[108-206] 1.3E-4 |
| ProSiteProfiles |
RA_dom (IPR000159) - T[110-206] 14.341 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[125-204] 4.75E-9 |
| Pfam |
RA_dom (IPR000159) - T[126-205] 8.4E-14 |
| ProSiteProfiles |
SARAH_dom (IPR011524) - T[208-255] 12.234 |
| Pfam |
SARAH_dom (IPR011524) - T[214-252] 6.5E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RASF5_HUMAN | 37.05 % | 168 | 1.22E-49 |
| RASF1_HUMAN | 36.398 % | 155 | 1.95E-45 |
| RASF3_HUMAN | 35.052 % | 111 | 9.19E-30 |
