- Transcript 'Boschl.CG.Botznik201...' >
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- Transcript 'KH2012:KH.C5.108.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g20024.01.t
Possible name(s)
DAW1; EED; POC1A
Gene model
Location
chr12 [14,900,185 / 14,901,433]
Amino acid sequence
Length: 415
>Boschl.CG.Botznik2013.chr12.g20024.01.p
MEKTKDKVSVDMDDFDDEFEDWENTEYDKPTQRNSNKRVRGRGKQVKKPNVKTLFRCVNS
LKEDHGKPLFGVSFNHFISTNEPQIFATVGSNRVTIYECCENGYIRLVQAYEDPDQDENF
YTCAWSVDSTTGHPLLAFAGYRGVVRVINIATKQCAKHYHGHGDAVNELKFHPTRLNILL
SASKDHSLRMWNVKTDTLICIFGGVEGHRDEVLSCDFDITGSKIVSCGMDHSLKIWRLDQ
EIIKLAIEASEKYDSTKCKKPFPTIHEHYPYFTTRDIHRNYVDCVKWYGDFLLSKSCENH
LVCWKPGFVESDIESLKPLEKTNVTILSRLQYQHCEIWYMRFSMDMKQKYLALGNQYGRV
FLWDLDKIDSSKTKCIPLINARCVSSIRQTAFSKEGNILICVSDDATIWRWDLQN
Nucleotide sequence
Length: 1,248
>Boschl.CG.Botznik2013.chr12.g20024.01.t
TGGAGAAAACCAAGGATAAAGTGTCTGTGGACATGGATGATTTTGATGACGAATTCGAAG
ACTGGGAAAATACGGAATACGATAAACCCACTCAGCGCAACTCAAATAAGCGCGTTCGCG
GCCGTGGAAAACAGGTAAAGAAGCCGAATGTGAAGACACTGTTCCGATGTGTAAATTCTT
TGAAAGAAGACCATGGCAAACCTCTGTTTGGCGTCAGTTTTAACCATTTCATCAGTACGA
ATGAGCCTCAGATATTTGCTACTGTCGGAAGCAACCGTGTGACTATTTATGAATGCTGTG
AGAATGGATATATAAGACTCGTTCAAGCTTACGAAGACCCAGATCAGGATGAAAATTTCT
ACACTTGCGCGTGGAGTGTTGACAGCACCACAGGCCATCCGTTACTGGCATTTGCTGGAT
ATCGCGGAGTGGTGCGAGTGATAAATATTGCCACGAAACAATGTGCCAAGCATTATCATG
GTCACGGCGATGCTGTGAATGAATTGAAGTTTCATCCGACCCGGCTGAATATCCTGCTTA
GCGCCTCTAAAGATCACTCTCTCCGTATGTGGAATGTCAAAACCGATACGTTGATCTGTA
TATTTGGCGGGGTGGAAGGTCACCGCGATGAGGTGCTGAGCTGTGATTTTGACATCACCG
GATCCAAGATAGTTTCTTGCGGGATGGATCATTCCCTGAAAATCTGGCGGCTTGACCAGG
AAATTATCAAGCTCGCTATAGAAGCCTCTGAGAAGTACGACTCCACGAAATGCAAGAAGC
CATTTCCCACGATTCATGAACATTACCCGTATTTTACCACCCGCGATATCCACCGCAATT
ACGTCGACTGCGTGAAATGGTACGGGGACTTTCTCCTGTCAAAATCCTGCGAGAATCACT
TGGTGTGTTGGAAGCCGGGATTCGTTGAGTCTGATATTGAATCTCTCAAACCTTTGGAGA
AAACTAACGTTACGATTCTGAGCCGGCTGCAGTATCAACATTGCGAGATATGGTACATGC
GATTCTCTATGGATATGAAACAAAAGTACTTGGCTCTCGGAAATCAGTATGGCAGAGTGT
TTTTGTGGGATCTCGATAAGATCGATTCCTCCAAGACCAAGTGTATCCCGCTGATTAACG
CAAGGTGTGTCAGCTCTATCCGGCAAACGGCTTTTTCGAAGGAGGGCAATATACTGATCT
GTGTCAGCGATGACGCCACAATATGGCGGTGGGATCTTCAGAACTAAA
| PANTHER |
Polycomb_EED (IPR037352) - T[23-413] 1.4E-146 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[50-413] 8.2E-118 |
| SMART |
WD40_repeat (IPR001680) - T[54-98] 87.0 - T[152-192] 2.0E-7 - T[195-237] 7.7E-6 - T[268-305] 110.0 - T[323-364] 160.0 - T[372-412] 2.2 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[56-414] 4.03E-46 |
| Pfam |
WD40_repeat (IPR001680) - T[154-192] 1.8E-5 - T[205-236] 3.8E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[159-201] 13.449 - T[205-239] 11.712 - T[385-415] 9.372 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[159-246] 19.433 - T[330-415] 9.995 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[179-193] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EED_HUMAN | 57.627 % | 493 | 8.0E-174 |