- Transcript 'KH2012:KH.C5.392.v1....' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R7.2...' >
- Clone 'cslv010i18' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g11382.01.t
Possible name(s)
RBM34; RRP7A
Gene model
Location
chr12 [13,171,351 / 13,176,151]
Amino acid sequence
Length: 297
>Boschl.CG.Botznik2013.chr12.g11382.01.p
MNIRVRKFLAPVNLAKIRDFESVMEYTQACPSGYSKIFVKYDSSCKYSHELLFKPDETRK
ENSLKPAGRTLLVANVPPYCSKTNLERIFSKFGKVDSVHLVHALGGESEYHAKPPVVTDL
TDNDRKYFPKKEEYGCPFAFIVYQDKSSITKAMGQTIKVAPTLLSRNEAIGMKKWAQEYY
SQFPNQDELKTNIDAYMARYDRAILQREEQEKLAGEEDNDGWTKVTKGGKTPFIARTEAN
QLKAKEKRRNRSRDLLNSYSYQIRESKRQKIAELREKFQEDKQRVQEMIEARKFKPF
Nucleotide sequence
Length: 894
>Boschl.CG.Botznik2013.chr12.g11382.01.t
GATGAACATTAGGGTGCGAAAATTTCTGGCCCCAGTAAATTTGGCCAAGATTAGGGATTT
CGAGTCCGTCATGGAATATACTCAAGCCTGTCCATCTGGATATAGTAAAATTTTTGTGAA
ATACGACTCCTCGTGTAAATACAGTCATGAGCTGCTGTTTAAACCGGATGAAACAAGAAA
AGAAAATTCGCTGAAGCCCGCAGGAAGAACGTTACTAGTCGCCAACGTTCCACCATATTG
CAGCAAAACCAATCTTGAAAGGATCTTTTCAAAATTTGGAAAGGTTGATTCCGTACATCT
AGTTCACGCCCTGGGCGGTGAATCCGAGTATCACGCGAAGCCTCCTGTTGTCACCGACTT
GACTGACAATGACAGGAAATACTTTCCAAAGAAAGAAGAATACGGCTGTCCTTTTGCCTT
TATAGTCTACCAAGACAAATCATCTATTACTAAAGCTATGGGCCAAACGATCAAAGTAGC
TCCAACTCTTTTATCGCGAAATGAAGCGATCGGTATGAAGAAATGGGCACAAGAGTATTA
CAGCCAGTTCCCAAATCAAGATGAACTGAAAACTAACATCGACGCTTATATGGCGAGATA
CGATCGTGCGATACTACAGAGAGAGGAGCAAGAAAAACTTGCGGGCGAGGAGGACAATGA
CGGGTGGACAAAGGTGACAAAGGGCGGAAAGACTCCATTTATCGCAAGAACCGAGGCTAA
CCAGTTGAAAGCCAAAGAAAAGAGGAGGAATAGAAGCAGGGATTTGCTGAACTCGTATTC
CTACCAGATAAGGGAGTCGAAGCGACAAAAAATTGCAGAGCTTCGAGAAAAATTCCAGGA
AGACAAGCAAAGGGTGCAGGAAATGATAGAGGCGAGAAAATTCAAGCCATTTTA
| PANTHER |
RRP7 (IPR024326) - T[31-297] 5.8E-56 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[46-162] 1.6E-10 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[55-101] 4.5E-10 - T[136-154] 4.5E-10 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[69-159] 9.9 |
| Pfam |
RRM_dom (IPR000504) - T[71-103] 2.6E-5 |
| Pfam |
RRP7 (IPR024326) - T[171-297] 5.7E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RRP7A_HUMAN | 34.317 % | 149 | 1.86E-43 |
| RRP7B_HUMAN | 47.619 % | 79.7 | 8.51E-19 |