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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr12.g08178.01.t

Possible name(s)

GBX2; HMX1; VSX2

Location

chr12 [12,581,815 / 12,591,327]

Sequences

Amino acid sequence

Length: 270

>Boschl.CG.Botznik2013.chr12.g08178.01.p
MCYARRRLQPLLATADNRYISKSYEPYACGVGGLTSHSISRIIGRSSPAPDNEGNEEQAS
NMSLSKNKDTSPSEASFDLRRDDHKCKNFIYYGRYRAIYQVMHKIKIWFQNRRTKWKREY
LSEWEVWAHQNYYAMHGLYGAAAAASALAVASVPGMPRPHPGIMTPPGIPQPPYADPMGN
MIKAGPFTHPSMIYPGPPQPRIQNPHSPPVTKPGPLLPGRLAGNGQGSMVPLPLNSQAMM
PQMPLYFFPNPMYAAAAANSRLTGDTQLPF

Nucleotide sequence

Length: 810

>Boschl.CG.Botznik2013.chr12.g08178.01.t
GATGTGTTACGCGCGACGCAGATTACAGCCACTGCTGGCGACCGCAGATAACCGATATAT
TTCGAAGTCGTATGAACCATACGCTTGCGGCGTCGGGGGTTTGACGAGCCACTCCATATC
GCGAATAATCGGGAGATCGTCGCCGGCTCCCGACAACGAAGGCAACGAGGAACAAGCCTC
GAATATGAGTTTGTCAAAAAATAAAGACACATCGCCCTCGGAGGCGTCGTTCGACTTGCG
CAGAGACGATCACAAGTGTAAGAACTTTATTTATTACGGCCGTTATCGTGCGATTTATCA
GGTTATGCATAAGATCAAGATCTGGTTCCAAAACCGCCGCACAAAATGGAAACGCGAGTA
TCTCAGCGAATGGGAAGTGTGGGCGCACCAAAATTACTACGCCATGCACGGGCTCTACGG
CGCCGCGGCCGCAGCCTCTGCGCTAGCAGTCGCCTCCGTACCCGGCATGCCCAGACCGCA
CCCGGGCATCATGACCCCGCCTGGAATACCCCAACCACCTTACGCAGACCCGATGGGTAA
CATGATAAAAGCTGGACCCTTCACGCATCCCAGTATGATTTACCCCGGGCCGCCGCAACC
ACGGATACAAAACCCGCATTCACCCCCAGTGACTAAACCGGGCCCTCTTTTACCTGGTAG
GTTAGCAGGTAACGGCCAAGGTTCCATGGTGCCTCTACCCTTAAATTCACAAGCAATGAT
GCCCCAGATGCCTCTTTACTTCTTCCCGAACCCCATGTACGCGGCCGCCGCGGCCAATTC
CAGATTAACGGGTGACACGCAGTTACCATT

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[103-130] 1.93E-5
ProSiteProfiles
Homeobox_dom (IPR001356) - T[104-119] 9.426
CDD
Homeobox_dom (IPR001356) - T[105-119] 1.79817E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value