- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g05801.01.t
Possible name(s)
ITIH2; VWA3A; VWA3B
Gene model
Location
chr12 [12,146,651 / 12,150,266]
Amino acid sequence
Length: 1,204
>Boschl.CG.Botznik2013.chr12.g05801.01.p
MTSLITATSFSYRYYVLSNPQSHMQEILDNAQIFNGVDDSSHPDDVRLLRRRPAWKTDEI
NPLLIQPHSDLIVTDVSQARKLEKVKALSAIPDESQTSEEWLENHSLTYQQLTLKDLLSK
GKKVKKFGEDTHMVFSGTVINEFEYKLNSAIETYHNRVKWLFEGTKKTFGLIKGDRVGVI
IDSSDANTGFGRLQVFQKSLLALINEQLSAKKSLYFMTFGTDVDCLWHCARDVNSRITEE
ARDYVREMKSSGGCNMLKAFKKIMKVKRLDSLVLILGGCPDQSSNPVFDYIEQCLLGKDL
PIHAVAYDTTNHKTHEALRKIADISKGRYHYYNSSEIRDCYKSSDVSLLLRESQRTLDML
SKIKQMRSGMLGNALISIENEIALEVEHNSLSRFLPRPVNHHQPLNIHKSDFHPSDSSIW
IKENGLRSQQLNLYQVLAPDAFDPVRDFVPILRKSVKSRVNQSAMQQFEWHDGSVKNMHV
DVAMLYDYQKRLGHAVNTYEARIEWLASASRRIWGTVCEKKIIILIDVSVSNKPYLVHLQ
HSIRLLLEQQVANKEAFNLIAFGSHPNMWKPQMVKPTKENLQAAWRWVLHLETGGSRNFL
NAFRFAIENSEDMQDFGGPQGIYYIGSGIPDQIEDVACSFVSEKCFGRDLKLHTILFCID
DYHQESELPSRYADLTHTASYLRNLAHQGNGRFHWFRESGIIESDDVTAIMQEMEKAVYY
SQRCATLVNAVKPKKEDKLKAIEPRKGKKVIMPPPLEHPRQTALSLAREQQAIRGENQKC
LAWRSPKKKATLPPAPYKNPKSNKSGKTDLSDKAQVEPFYTEDKGNVGVVFKKYPKKKSV
RKVIPEPILPEMEERLSSKQWLKRYGINKLKLNLNRYVSGPVCVHDKTNVKSTGGQAHAK
WFCSIFPSVEVNDKVRHIDMNIKEIEDYVTQLTRVGKRYLQRTQWLLSASKRTFGLVLES
RVIILVDVSGSMENRMDDLKNELKHLIWEQLRNNRVGFNIISFSDHIRSWQDSTTDANDT
TCEDATKWVTSLHAHGGTKTLDALKEALSDNTAEALYLLSDGKPDTSVKLTLETAVKLNR
RRIPIHTILFNSNDSNHAMFLANLAHQSGGRYHVCKGDRDANLTAYKMMSEGFVDEDDPN
LPDFQGDDLKRLRSEITTARKYITQARLYKKIVEQHKEEWVSSRQNEKATPGDGSAISKR
PFLP
Nucleotide sequence
Length: 3,615
>Boschl.CG.Botznik2013.chr12.g05801.01.t
AATGACTAGTTTGATAACCGCCACATCATTTTCTTACAGATATTATGTCTTAAGCAACCC
ACAATCACATATGCAGGAGATACTAGACAACGCGCAAATATTCAATGGCGTCGACGACTC
AAGTCACCCCGATGACGTCAGACTTCTCCGACGCCGACCGGCTTGGAAAACCGACGAAAT
CAACCCGCTGCTGATCCAACCTCACTCTGACTTGATAGTCACCGACGTATCACAGGCCCG
GAAGTTAGAAAAAGTCAAAGCACTTTCAGCCATCCCGGACGAAAGTCAAACCAGTGAGGA
ATGGCTCGAAAACCACTCTCTCACATACCAGCAGCTCACTCTCAAAGATTTACTATCGAA
AGGGAAGAAAGTCAAGAAATTCGGGGAGGATACGCATATGGTTTTCAGCGGTACTGTAAT
CAACGAATTTGAATACAAGCTAAACTCAGCCATCGAAACATACCACAACAGAGTAAAGTG
GCTGTTTGAAGGCACTAAAAAGACTTTTGGGCTCATCAAAGGCGACCGTGTTGGCGTTAT
TATCGATTCATCCGATGCAAACACCGGGTTCGGCAGGTTACAAGTATTTCAAAAATCTCT
GCTAGCTCTCATCAACGAACAACTTTCCGCCAAAAAAAGCCTGTACTTCATGACGTTTGG
AACTGATGTCGATTGCTTGTGGCACTGTGCGAGAGACGTGAACTCCAGAATTACAGAAGA
GGCTAGGGATTATGTTCGTGAAATGAAGTCCAGCGGAGGATGTAACATGCTCAAAGCGTT
CAAAAAGATAATGAAAGTCAAACGGTTAGATTCTCTAGTTCTAATACTAGGCGGTTGCCC
GGATCAAAGCTCCAATCCTGTCTTTGATTACATCGAACAATGCCTACTCGGCAAAGATCT
TCCGATACACGCTGTGGCGTATGACACCACGAATCATAAAACACACGAGGCTTTGCGTAA
AATCGCAGACATATCAAAAGGCCGATATCATTATTACAATTCGTCGGAGATACGCGATTG
CTACAAAAGCAGTGATGTGTCTTTGTTGCTTCGTGAATCGCAAAGAACTTTAGACATGTT
GTCGAAAATTAAGCAAATGCGCAGCGGTATGTTGGGGAATGCTCTTATCAGTATTGAGAA
CGAGATAGCTTTGGAAGTGGAACACAACAGCTTGTCACGATTTTTGCCAAGGCCCGTCAA
CCACCATCAACCTTTAAATATCCACAAATCTGACTTTCATCCGTCTGATAGCTCCATTTG
GATAAAAGAGAATGGTTTACGTTCGCAACAGTTGAATTTGTATCAAGTCCTAGCACCAGA
TGCATTCGACCCGGTCCGAGATTTTGTGCCGATTCTTCGTAAATCTGTAAAGTCCAGAGT
GAATCAATCAGCCATGCAGCAATTCGAATGGCATGACGGTTCGGTAAAAAATATGCACGT
TGATGTCGCGATGTTGTACGACTATCAAAAGCGCCTCGGACACGCAGTTAACACTTACGA
AGCAAGGATAGAATGGTTGGCATCGGCCAGTCGGCGAATATGGGGTACGGTTTGCGAGAA
AAAAATCATTATTTTGATTGATGTTTCTGTATCGAACAAACCGTATTTAGTCCATTTGCA
GCATTCAATTCGATTACTGCTTGAACAGCAAGTAGCCAACAAAGAAGCTTTCAATCTTAT
CGCGTTTGGGAGTCATCCGAACATGTGGAAGCCACAAATGGTCAAACCCACCAAAGAAAA
CCTGCAGGCAGCTTGGCGATGGGTGCTGCACTTGGAGACTGGGGGCAGCCGCAATTTTCT
CAACGCATTCCGGTTCGCTATCGAAAACTCAGAGGATATGCAAGACTTTGGCGGTCCTCA
AGGGATATACTACATAGGAAGTGGCATACCCGATCAAATCGAGGACGTGGCGTGTTCCTT
TGTAAGCGAAAAATGCTTCGGACGTGATTTGAAACTGCACACTATTCTGTTCTGCATCGA
CGATTACCATCAGGAAAGCGAGCTGCCTAGCAGATACGCGGATTTGACGCATACGGCGAG
TTACCTTCGAAATTTAGCCCATCAAGGAAACGGGCGATTTCATTGGTTCAGAGAATCCGG
GATCATTGAGAGTGACGACGTAACGGCGATCATGCAAGAAATGGAGAAAGCTGTCTACTA
TTCGCAGAGATGCGCGACACTCGTAAACGCCGTCAAGCCGAAAAAAGAAGATAAATTGAA
AGCCATCGAGCCAAGGAAAGGGAAAAAAGTGATTATGCCTCCACCTCTTGAACATCCCAG
ACAGACAGCGTTGAGTTTAGCAAGAGAGCAACAGGCCATTAGAGGCGAAAACCAAAAATG
CTTGGCATGGCGTTCTCCTAAGAAAAAAGCAACACTTCCACCGGCACCTTACAAGAATCC
AAAGTCGAATAAGTCCGGAAAAACCGACTTATCAGACAAGGCACAAGTCGAGCCGTTTTA
CACCGAAGACAAAGGAAATGTAGGCGTTGTTTTCAAGAAATACCCGAAAAAGAAAAGCGT
CCGTAAGGTCATTCCAGAGCCGATTCTTCCAGAAATGGAAGAGAGACTGTCTTCGAAACA
GTGGCTGAAAAGATATGGCATCAACAAGCTCAAATTGAACCTAAACAGATACGTGTCAGG
CCCGGTTTGCGTACACGACAAGACGAACGTGAAATCAACGGGTGGTCAGGCGCACGCGAA
ATGGTTCTGTTCCATATTCCCAAGCGTTGAAGTTAACGATAAAGTGCGGCACATCGACAT
GAATATCAAAGAAATCGAGGACTACGTCACTCAACTGACACGTGTCGGTAAACGTTACTT
GCAACGCACGCAATGGCTGCTGTCGGCAAGTAAGAGAACTTTTGGACTTGTCCTCGAGAG
TAGAGTTATTATCCTCGTGGATGTGTCAGGCTCAATGGAAAACCGTATGGATGATCTGAA
AAACGAACTCAAACATCTAATCTGGGAGCAGCTTCGGAATAACCGTGTCGGTTTTAACAT
AATATCATTCTCGGATCACATAAGATCTTGGCAAGACAGCACAACTGATGCAAACGATAC
TACATGTGAAGACGCAACAAAATGGGTAACGTCCCTTCACGCACACGGCGGAACAAAAAC
GCTGGATGCTTTAAAAGAAGCTCTCTCTGACAACACAGCTGAAGCGTTGTACCTTCTTTC
AGATGGTAAACCGGACACGAGTGTAAAGCTAACTTTGGAAACCGCAGTTAAACTGAACAG
AAGACGAATACCGATCCACACGATACTGTTCAACAGCAATGACAGCAACCACGCGATGTT
CTTGGCTAATCTCGCACACCAATCTGGCGGGCGCTACCACGTATGCAAGGGAGATAGAGA
CGCAAACTTGACTGCTTACAAGATGATGTCGGAAGGATTCGTGGATGAGGACGACCCAAA
CCTTCCTGACTTTCAAGGTGACGATTTGAAGCGGCTACGTTCTGAGATTACAACCGCAAG
GAAATACATAACGCAAGCGAGATTATACAAGAAAATCGTAGAGCAGCATAAGGAAGAATG
GGTTTCGTCCCGGCAAAACGAAAAGGCCACACCGGGCGATGGAAGCGCGATATCAAAACG
ACCGTTTCTGCCATG
| SMART |
VWF_A (IPR002035) - T[173-345] 0.17 - T[959-1127] 6.7E-9 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[178-334] 1.69E-7 - T[518-696] 6.67E-11 - T[961-1126] 1.25E-20 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[179-344] 2.4E-7 - T[519-714] 5.1E-6 - T[959-1129] 1.0E-27 |
| Pfam |
VWF_A (IPR002035) - T[179-330] 3.6E-19 - T[521-655] 1.1E-7 - T[961-1114] 9.1E-19 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[961-1156] 10.376 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VWA3B_HUMAN | 21.246 % | 137 | 1.84E-32 |
| VWA3A_HUMAN | 41.594 % | 898 | 0 |
