Aniseed - Transcript Card

Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr12.g02299.01.t

Possible name(s)

EIF3L

Gene model

Boschl.CG.Botznik2013.chr12.g02299

Location

chr12 [11,368,802 / 11,377,258]

Sequences

Amino acid sequence

Length: 532

>Boschl.CG.Botznik2013.chr12.g02299.01.p
MYQSSTTEGAKYGEDFGLHTGDPQQDLEYERQRQLSPLVPEAVQSFLQYFQKAINEQDIF
EIENHYENNWNRLTERMFRTEAWPEAELIEGLVNQDSLFLILYKELYYRHIYARVQSGPD
QEQRFKSYYNYCDLFNYILSAETPVPLQLPNQWLWDIIDEFIYQYQSFSQYRSKMSKKSE
EDIETLKSSPKIWNVHSVLNVLHSLVDKSRINEQLEAYNDGADQEKVIQIGGSFGASPMY
KMLGYFSIIGLLRLHSLLGDYHQALAVMRNIDISKKSSVMSRVPECQITTYYYIGFSYLM
MRRYEDAINTFSSILTHIQRTKNSLQQRSSQFKIDMISKQTDQMYNLLAICVTLYPVRID
ESLSRQMIEKTGEEKRARMQRGDKSAFEEAFSFACPKFVSPVAPNYDAGLVNLHKEPMNH
QLLVFLEEVEQQAMLPTIRSYLKLYSTMPVEKLADFLDMQPHELRAELMCLKHKMKNSQS
SSGSDHQLEVDFYIDDDMIHIADTKIERGYADYFIEQILNFEKLCKHISALR

Nucleotide sequence

Length: 1,599

>Boschl.CG.Botznik2013.chr12.g02299.01.t
TGTATCAGTCCTCAACAACGGAAGGTGCCAAGGATGGAGAAGACTTCGGACTCCACACCG
GTGATCCGCAACAGGATCTGGAATATGAAAGACAGAGGCAACTCTCTCCTCTAGTTCCTG
AAGCAGTACAGAGCTTTTTGCAATACTTCCAAAAAGCCATTAATGAACAGGACATCTTCG
AAATAGAGAATCATTATGAAAACAAGTGGAATCGACTTACGGAACGAATGTTTCGTACTG
AAGCTTGGCCTGAAGCCGAACTCATCGAAGGTCTCGTCAACCAGGGTTCCCTTTTCCTTA
TCCTTTACAAGGAATTGTACTACCGGCACATTTACGCCCGAGTACAATCGGGTCCGGATC
AAGAGCAACGTTTCAAATCGTATTACAACTATTGCGATCTGTTCAACTACATTTTGAGCG
CCGAGACCCCCGTACCGTTGCAGCTGCCGAACCAATGGCTGTGGGACATCATCGACGAGT
TTATTTATCAGGACCAATCATTCAGCCAGTACAGGAGCAAGATGAGCAAGAAATCGGAGG
AGGATATCGAGACGCTGAAGAGCAGTCCCAAGGTCTGGAATGTGCACAGCGTTCTCAACG
TCTTGCACTCTCTCGTTGACAAATCTCGAATCAACGAGCAGCTGGAGGCTTACAACGACG
GGGCAGACCAAGAGAAAGTGATACAAATCGGAGGTAGTTTCGGCGCGTCCCCGATGTACA
AGATGCTCGGATACTTCAGCATCATTGGACTACTGCGCCTGCACAGCCTACTTGGAGATT
ATCATCAAGCGCTGGCCGTCATGAGAAACATTGACATTTCGAAAAAGGGTTCTGTTATGT
CTCGCGTACCCGAGTGCCAGATTACGACATACTACTATATCGGATTTTCGTATTTGATGA
TGCGAAGGTATGAAGATGCGATCAACACGTTCTCGTCCATACTGACGCACATACAAAGGA
CAAAGAACTCTCTCCAGCAAAGATCGAGTCAATTCAAAATCGATATGGTCTCGAAACAAA
CGGACCAGATGTACAATCTACTGGCCATATGTGTGACGCTGTACCCGGTTCGTATCGACG
AGTCCCTGTCGCGGCAAATGATAGAGAAAACGGGCGAAGAGAAACGCGCCAGAATGCAGC
GAGGGGATAAAAGCGCTTTCGAAGAGGCTTTCTCATTCGCCTGCCCGAAATTCGTGTCGC
CCGTCGCTCCAAATTACGACGCCGGCCTGGTCAACTTGCATAAAGAACCGATGAATCATC
AGCTCCTGGTTTTCCTGGAAGAAGTGGAACAGCAGGCCATGCTGCCGACGATTCGCAGCT
ACCTGAAGCTGTACTCGACTATGCCCGTCGAGAAGCTGGCCGATTTTCTTGACATGCAAC
CGCACGAACTGCGAGCGGAACTGATGTGTCTGAAGGACAAGATGAAAAACAGTCAATCCA
GCAGCGGCAGTGACCATCAGTTAGAGGTGGATTTCTATATCGATGACGACATGATACACA
TTGCTGACACGAAAATTGAGCGCGGCTACGCCGATTACTTCATTGAGCAGATTCTGAATT
TCGAGAAGGTATGCAAGCACATATCGGCTCTGCGTTGAA

InterProScan

PANTHER	eIF3l (IPR019382) - T[13-529] 4.2E-219
Hamap	eIF3l (IPR019382) - T[29-523] 29.51
Pfam	eIF3l (IPR019382) - T[123-520] 1.7E-159
Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[236-355] 8.6E-6
ProSiteProfiles	TPR_repeat (IPR019734) - T[288-321] 8.083

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EIF3L_HUMAN	58.288 %	651	0