- Transcript 'KH2012:KH.L5.20.v1.A...' >
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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g00259.01.t
Possible name(s)
BBS4; OGT; TTC8
Gene model
Location
chr12 [11,039,038 / 11,041,241]
Amino acid sequence
Length: 523
>Boschl.CG.Botznik2013.chr12.g00259.01.p
QYQLGFYLIMTENSASPPGEPADSDQPPLPIPKPKPRPKKQADLPVIERRNWLIHQHFIR
KELESCKQLIREQLIETGGECTYALYVQSMIARSEGHITDSTELLQACDKLQTNSPEILK
QIGRNLFLVGKYKEAIACYSKASDRSVHRDWEISHQLGVCYLQMKRYDKAEECLKEALES
SKHDVTYSTLANMYLEQNHIEKAMDLLKDATSFAPENLDILTTLGLLYLRQGNFHESFKL
LGQAMTFDPENYKAILAAGSLMQVHGDFDVALTKYRVSAHKAPESAPLWNNIAMCFYGKK
KYVAAVTCLKRATYLAPFDWKILYNLSLLHLTMQQYASAFQFGSAALKLKSKNASIYMLV
GIALSHLGEIENARKSYQESYKLDPNNAYLLLNYAVFLHRNNDNRQCLRLIQELEKVAKS
RSDLKQDKELQDTAKTLSAALQVGDRLVADEKKTKEKKKGSKGSKQSSNQVSLDKEDAAN
SERNEKPNTDLPSLPSVPRGRLPALEIQSNPSEIRNKIPEPLG
Nucleotide sequence
Length: 1,574
>Boschl.CG.Botznik2013.chr12.g00259.01.t
TCAATATCAGTTGGGCTTCTATCTTATCATGACTGAAAACAGTGCCAGTCCTCCAGGCGA
GCCGGCAGATTCCGATCAGCCTCCATTGCCCATTCCGAAGCCAAAGCCGCGTCCGAAAAA
ACAAGCTGATCTCCCGGTCATAGAAAGGCGAAATTGGCTCATCCACCAGCACTTCATTCG
AAAAGAATTGGAATCCTGCAAGCAGCTGATCCGAGAGCAACTCATTGAAACCGGCGGGGA
ATGCACCTACGCTTTGTACGTCCAAAGCATGATAGCCAGAAGCGAGGGTCACATCACAGA
CTCTACCGAGCTGCTACAGGCTTGCGACAAACTACAGACAAACAGCCCGGAAATATTGAA
GCAAATCGGAAGGAATTTATTTCTTGTCGGAAAATACAAGGAAGCGATAGCCTGCTACTC
AAAAGCTTCCGATCGTTCGGTCCATCGAGATTGGGAGATTTCGCACCAATTAGGCGTGTG
TTATTTACAAATGAAGCGTTACGACAAGGCGGAAGAATGTCTCAAAGAAGCTTTGGAATC
TAGCAAGCACGACGTTACCTATTCGACTTTGGCGAACATGTATTTGGAACAAAACCATAT
CGAGAAAGCGATGGACTTGTTGAAAGATGCTACTTCCTTCGCACCTGAAAATTTAGATAT
ATTAACTACCCTCGGTCTGTTGTATTTGCGCCAAGGAAACTTCCACGAATCTTTCAAGCT
TCTCGGACAAGCAATGACATTCGACCCCGAAAACTACAAGGCGATTCTAGCAGCAGGATC
GTTAATGCAAGTGCATGGAGACTTCGACGTCGCTTTAACGAAATACAGAGTGTCCGCCCA
CAAAGCCCCAGAGAGCGCACCGCTCTGGAATAATATCGCGATGTGCTTTTACGGAAAGAA
AAAATATGTCGCCGCAGTCACTTGTTTAAAGCGGGCCACCTATCTGGCGCCTTTCGATTG
GAAGATTCTCTATAATCTCTCTCTTTTGCATCTCACGATGCAGCAGTATGCGAGTGCTTT
TCAATTTGGGAGCGCTGCATTGAAGTTGAAGAGCAAGAATGCTAGTATATACATGCTCGT
CGGTATTGCTTTGAGTCATCTTGGTGAGATCGAGAATGCCCGTAAGTCGTACCAGGAATC
GTATAAACTCGACCCGAACAATGCTTATCTTCTTCTAAACTACGCCGTTTTTCTGCATCG
AAATAATGACAACAGACAGTGCTTGAGACTTATACAGGAATTGGAGAAGGTCGCGAAGTC
CCGGAGCGATTTGAAGCAGGACAAAGAACTGCAGGACACGGCGAAAACTTTGAGTGCCGC
GCTGCAAGTTGGCGATAGACTCGTAGCAGATGAGAAAAAGACAAAGGAGAAAAAGAAAGG
CTCCAAGGGCTCAAAACAATCTTCGAATCAAGTCAGCCTCGACAAGGAAGATGCAGCCAA
CAGTGAACGTAATGAAAAACCCAACACCGATTTGCCATCCCTACCCAGTGTCCCTCGCGG
CAGGTTGCCGGCCCTGGAGATACAAAGCAACCCTTCAGAAATTCGGAACAAGATTCCCGA
ACCTTTGGGGTGAT
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[51-259] 2.3E-32 - T[260-456] 7.8E-28 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[82-421] 48.1 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[82-183] 2.66E-13 - T[182-410] 1.29E-32 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[116-149] 7.11 - T[151-183] 5.841 - T[184-217] 9.44 - T[218-251] 10.768 - T[252-285] 5.93 - T[286-319] 7.139 - T[320-353] 6.697 - T[354-387] 11.417 |
| SMART |
TPR_repeat (IPR019734) - T[116-149] 0.98 - T[151-184] 7.5E-5 - T[185-217] 37.0 - T[218-251] 0.18 - T[286-319] 0.0046 - T[320-353] 5.5 - T[354-387] 0.0021 |
| Pfam |
TPR_repeat (IPR019734) - T[219-251] 0.069 - T[286-318] 0.012 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BBS4_HUMAN | 51.948 % | 457 | 4.6E-157 |