- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr11.g68443.01.t
Possible name(s)
GALNT1; GALNT13; GALNT2
Gene model
Location
chr11 [86,500 / 88,225]
Amino acid sequence
Length: 574
>Boschl.CG.Botznik2013.chr11.g68443.01.p
MLKLFGRRNCRAVLLTSLVWVMIDMVLIFNYTDCSSNCSEQKVKKEDGGGAAGFIAKQVQ
AIGNALPILSNPKGPGEMGKAVHVPKDREQEKKDKFKINQFNLVASEMISVNRSLPDVRM
AACKSKSYPTKLPKTSVVIVFHNEAWSTLLRTVHSIINRSPRHLLEEIILVDDESERDFL
GKPLEDYMGKLPVPVHVHRMGKRSGLIRARLRGASASKGQVITFLDAHCECTEGWLEPLL
AEIAKDPSTVVCPIIDVISDETFEFLVGSDMTYGGFNWKLNFRWYPVPQREMDRRNGDRS
VPVRTPTMAGGLFSIDRDYFEKIGTYDSGMDIWGGENLEMSFRIWQCGGTLLIVTCSHVG
HVFRKATPYTFPGGTGQIINKNNRRLAEVWMDDYKNFFYIVSPGVLKQNYGDVSERLNLR
NKLQCKSFRWYLENIYPDSQIPSSYKNLGEIKNEQSPVCLDTMGRKENEKCGLFSCHGLG
GNQVWAYTHNKEIRADDLCLDVSKKSGPVMMVKCHHLKGNQQWEYDDASRIMRHTNTGQC
LSRSPSESQVPAMRDCDKNDSSMKWTLSNVSLPV
Nucleotide sequence
Length: 1,725
>Boschl.CG.Botznik2013.chr11.g68443.01.t
TATGTTGAAACTGTTTGGCAGACGAAACTGCAGGGCGGTTTTGTTAACGTCGCTAGTATG
GGTGATGATCGATATGGTGCTAATTTTCAACTACACGGATTGTTCTTCAAACTGTTCTGA
ACAAAAAGTAAAGAAGGAGGATGGAGGTGGGGCTGCGGGGTTCATCGCTAAGCAAGTGCA
AGCCATCGGTAATGCGTTGCCAATTTTAAGCAACCCTAAAGGCCCGGGTGAAATGGGAAA
AGCGGTGCATGTCCCTAAAGATAGGGAGCAAGAGAAAAAAGACAAGTTCAAAATCAATCA
ATTCAACCTGGTCGCGTCGGAGATGATATCGGTGAACAGGTCACTTCCTGATGTAAGAAT
GGCCGCTTGCAAGAGCAAGTCATATCCGACGAAACTTCCGAAAACGTCGGTCGTTATCGT
TTTCCACAATGAGGCTTGGTCCACGTTATTGCGAACGGTACATAGCATAATAAATAGGTC
GCCGAGACATTTGCTGGAAGAGATTATACTCGTAGATGACGAGAGTGAGAGAGATTTTCT
TGGTAAACCCCTTGAGGACTACATGGGGAAGCTACCAGTGCCTGTGCACGTGCATCGGAT
GGGAAAGAGGTCCGGTTTAATACGTGCAAGACTGAGGGGTGCGTCAGCCTCTAAGGGACA
AGTTATTACGTTTCTTGATGCTCACTGTGAATGCACTGAAGGCTGGCTTGAACCGTTGCT
TGCAGAAATAGCAAAAGACCCTTCCACTGTTGTCTGTCCGATCATAGATGTTATCAGCGA
TGAAACCTTTGAATTTTTGGTAGGGTCCGATATGACATATGGTGGATTTAATTGGAAGCT
GAATTTTCGATGGTACCCAGTTCCGCAACGGGAAATGGACAGACGCAACGGGGATAGGTC
TGTACCTGTACGCACCCCGACAATGGCAGGTGGCCTGTTTTCTATCGACAGAGATTATTT
TGAAAAAATTGGAACTTACGATTCAGGGATGGATATATGGGGTGGTGAAAACTTGGAGAT
GTCGTTCAGGATATGGCAGTGTGGTGGGACTCTACTCATTGTAACATGCTCCCATGTTGG
GCATGTATTCCGTAAGGCAACACCTTATACGTTTCCAGGCGGCACTGGGCAAATTATCAA
CAAAAATAATCGACGGTTAGCAGAAGTGTGGATGGATGACTATAAAAATTTCTTTTACAT
AGTATCACCGGGTGTGTTGAAGCAAAACTACGGCGATGTGTCCGAGAGACTGAATTTGCG
CAACAAACTACAGTGTAAATCCTTCCGTTGGTACCTTGAAAATATATATCCAGACTCGCA
GATACCGTCCTCGTATAAAAATCTGGGAGAAATTAAAAACGAACAATCGCCCGTGTGCTT
GGATACAATGGGCAGGAAAGAAAACGAAAAGTGCGGCCTATTCAGCTGTCACGGGCTTGG
AGGTAATCAAGTGTGGGCTTACACGCATAACAAAGAAATAAGAGCCGACGATTTGTGCTT
GGATGTGTCTAAAAAGAGCGGGCCGGTCATGATGGTGAAGTGTCATCATTTGAAAGGAAA
TCAACAATGGGAATATGACGACGCGAGCAGGATTATGCGTCATACTAATACCGGACAATG
TTTATCACGGTCGCCGTCAGAATCTCAAGTGCCCGCTATGCGGGACTGTGATAAAAACGA
TTCATCAATGAAATGGACTCTCAGTAATGTTAGCCTTCCAGTATA
| Gene3D |
Nucleotide-diphossugar_trans (IPR029044) - T[63-445] 7.7E-171 |
| SUPERFAMILY |
Nucleotide-diphossugar_trans (IPR029044) - T[112-438] 1.03E-70 |
| Pfam |
Glyco_trans_2-like (IPR001173) - T[136-320] 2.1E-36 |
| SUPERFAMILY |
Ricin_B-like_lectins (IPR035992) - T[444-569] 1.24E-35 |
| CDD |
Ricin_B_lectin (IPR000772) - T[449-567] 4.24972E-26 |
| SMART |
Ricin_B_lectin (IPR000772) - T[449-568] 8.0E-27 |
| Pfam |
Ricin_B_lectin (IPR000772) - T[449-565] 3.4E-27 |
| ProSiteProfiles |
Ricin_B_lectin (IPR000772) - T[459-568] 24.978 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GALT1_HUMAN | 70.442 % | 845 | 0 |
| GLT13_HUMAN | 67.376 % | 811 | 0 |
| GALT2_HUMAN | 46.623 % | 440 | 4.81E-149 |
