- Transcript 'KH2012:KH.L108.56.v1...' >
- Transcript 'KH2012:KH.C7.67.v2.C...' >
- Molecular Tool 'Tox MO (Satou lab)' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr11.g45142.01.t
Possible name(s)
RNF225; SH3RF1; TRIM45
Gene model
Location
chr11 [1,772,547 / 1,776,592]
Amino acid sequence
Length: 287
>Boschl.CG.Botznik2013.chr11.g45142.01.p
MLVMGNNACEECSICYETLKNPRILPCWHAACYTCILGMTQGGNGNAISCHICRSPTLFE
NVRSLPQPITCEFCGKLLTNPKKLPSCNSLFCSECIQQHLNERYTRTSFMNDGNDTHTDI
QNARLCPVCFSFHTRAVSDCGHYLCQGCDSESMRTERGKCCVCDAVDSPPPEPVNPLETE
YALRNQYSSRPAHHQVNPEELQTALDLVGLLKQHEGRRRHTRTRPQHISPMNDQENYFLK
WMTVFVTLILMSFLCGLDVISWILGATIVLITRFEKGAAIWIKDFAL
Nucleotide sequence
Length: 864
>Boschl.CG.Botznik2013.chr11.g45142.01.t
TGCTTGTGATGGGTAACAATGCTTGCGAAGAATGCAGTATTTGCTATGAAACTTTAAAAA
ATCCCCGAATCCTGCCGTGCTGGCATGCAGCATGTTACACCTGCATCTTGGGAATGACTC
AAGGCGGTAATGGAAAGGCTATATCATGCCACATTTGTCGAAGCCCGACGCTATTCGAAA
ACGTCCGTTCGCTACCGCAACCGATTACATGTGAATTTTGTGGAAAGTTACTCACCAACC
CGAAGAAACTTCCGTCTTGTAATAGTCTATTCTGTTCTGAGTGTATTCAGCAGCACTTGA
ATGAGAGGTATACGCGCACATCTTTTATGAATGATGGAAACGACACCCACACCGATATAC
AGAATGCCAGACTGTGTCCAGTGTGTTTCTCGTTTCATACAAGAGCTGTCAGTGATTGTG
GACATTACTTGTGCCAAGGATGCGATTCGGAAAGCATGCGGACGGAGCGCGGGAAGTGCT
GTGTATGCGACGCTGTCGATAGCCCACCTCCAGAACCTGTGAATCCATTGGAAACCGAAT
ATGCACTACGCAATCAATACAGCAGTCGACCAGCTCATCACCAAGTCAATCCCGAGGAAC
TTCAAACTGCTCTAGATTTAGTTGGGCTTCTGAAGCAGCACGAAGGGCGCCGCAGGCATA
CCCGCACTAGGCCGCAGCATATTTCCCCAATGAACGATCAGGAAAACTACTTTCTGAAAT
GGATGACCGTATTTGTCACGCTGATATTGATGAGTTTTCTTTGTGGTCTGGACGTAATCA
GTTGGATTCTGGGAGCAACCATTGTGTTGATAACCAGATTTGAAAAGGGGGCGGCAATTT
GGATAAAAGATTTCGCTTTATAAT
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[6-63] 1.7E-10 - T[64-110] 1.7E-7 - T[111-204] 7.3E-6 |
| Pfam |
Znf_C3HC4_RING-type (IPR018957) - T[12-53] 7.2E-7 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[12-54] 11.176 - T[126-164] 8.86 |
| SMART |
Znf_RING (IPR001841) - T[12-53] 2.9E-7 - T[71-119] 6.8 - T[126-163] 0.083 |
| Protein Name | Identity | Bit Score | e-value |
|---|