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TRANSCRIPT CARD

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  1. Molecular Tool 'Hox12-MO (Ikuta 2010)' > 
  2. Transcript 'KH2012:KH.C1.1098.v1...' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr10.g67926.01.t

Possible name(s)

GJA3; GJC1; GJC2

Gene model

Boschl.CG.Botznik2013.chr10.g67926

Location

chr10 [1,465,181 / 1,468,890]

Sequences

Amino acid sequence

Length: 156

>Boschl.CG.Botznik2013.chr10.g67926.01.p
MVYHDEQSSFICNTLTPGCTNVCFNRFSPISQLRYWSLMVLVVSTPSIIFYLYAMHVVYH
ADVKFPVEENGKEVVNKLAMNKQAYPPGKKRRRDSERKGGSAPPLYEVTKLEDVDDWSKD
AARYRRKHKSSRDDGGYGSNTDNNASFGGDINQGRR

Nucleotide sequence

Length: 471

>Boschl.CG.Botznik2013.chr10.g67926.01.t
AATGGTGTATCACGATGAACAGAGCAGCTTTATATGCAACACCCTCACGCCAGGTTGCAC
GAACGTTTGTTTCAACAGGTTCAGTCCAATATCACAGTTAAGATACTGGTCGTTGATGGT
CTTGGTAGTGTCAACACCAGCTATCATATTTTACCTTTACGCCATGCACGTAGTTTACCA
CGCCGATGTCAAGTTTCCGGTGGAAGAGAATGGGAAAGAGGTGGTTAACAAATTAGCCAT
GAACAAACAAGCGTATCCTCCGGGCAAGAAGCGTCGCCGAGATTCGGAAAGAAAGGGAGG
GTCCGCTCCCCCGCTTTATGAAGTCACGAAGCTAGAAGACGTAGACGACTGGAGCAAAGA
CGCGGCGCGGTATAGACGCAAACACAAGTCAAGTAGGGATGATGGTGGATATGGATCCAA
CACGGACAATAATGCATCCTTCGGAGGTGATATTAATCAGGGACGCAGGTG

InterProScan

SMART
Connexin_N (IPR013092) - T[1-34] 9.6E-12
Gene3D
Connexin_N_sf (IPR038359) - T[1-104] 6.4E-24
PANTHER
Connexin (IPR000500) - T[1-103] 2.4E-35
Pfam
Connexin_N (IPR013092) - T[2-82] 4.3E-26
PRINTS
Connexin (IPR000500) - T[10-32] 1.7E-11 - T[35-55] 1.7E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CXG1_HUMAN 33.571 % 79.3 3.95E-18
CXG2_HUMAN 46.667 % 77 2.79E-17
CXA3_HUMAN 50.877 % 77 3.3E-17