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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr10.g12545.01.t

Possible name(s)

GP2; TECTA; UMOD

Location

chr10 [16,025,102 / 16,036,797]

Sequences

Amino acid sequence

Length: 447

>Boschl.CG.Botznik2013.chr10.g12545.01.p
TPAGEAPNISNMKTLTILVTLVATALSQEILEVTCGQDAIEARFNKQTALAAEYTMQELH
FNDPSCIFDSEEGEYYVKRIEPLSSCGTDVTVNKTHAKYTNSISSGEIETGLSFPHGIIV
GQPENNRLISVSYECTYKIDLRVSSAFIPNITILKIPIPDAIGEGFFQVAMALYEDATYR
DLKTTPGSVPILQPEETVFVGVTMVGETSEDVFILMRRCWATPNEDPDSEPYYDLITDSC
PVKDAVQGSLTVTQNGIGQQALWQTKVFRFVGDGDSYQNVWLHCDLTLCVQRTCEPTCSA
RRKRSVGDGAEHNIVSVGPFMKQPRLLEEENFNINEEIVTEILIKNESSPKLDEDVRHLD
DSVRRLSETMEKIVSKLDDKPGVEKHTDDKEWYEDQTFIIIAAAVVAFCVLCFAIALIAV
LMRWKNNTARQGGNVTPTGTINKGFNI

Nucleotide sequence

Length: 1,346

>Boschl.CG.Botznik2013.chr10.g12545.01.t
GACGCCTGCGGGAGAAGCACCAAGTATATCCAATATGAAGACTTTAACGATACTGGTCAC
CCTCGTGGCGACGGCTTTGTCTCAAGGGATCCTTGAGGTAACATGTGGCCAAGATGCCAT
CGAAGCACGTTTCAACAAGCAAACGGCGCTTGCGGCAGAGTACACAATGCAAGAACTTCA
TTTCAACGATCCGAGCTGTATATTTGACAGCGAGGAAGGAGAATATTATGTAAAAAGAAT
CGAACCTCTCAGCAGTTGCGGGACAGATGTCACGGTCAACAAGACCCATGCCAAATACAC
CAACTCCATCTCATCTGGGGAGATCGAAACCGGACTGTCGTTTCCCCACGGTATCATCGT
CGGCCAGCCTGAAAACAACCGGTTGATCAGTGTTTCGTACGAGTGCACTTACAAGATCGA
TCTCCGTGTCAGTTCGGCCTTTATACCGAACATAACTATACTGAAAATTCCCATTCCTGA
TGCCATCGGCGAGGGATTTTTCCAAGTGGCCATGGCCCTCTACGAAGACGCAACTTACCG
TGACTTGAAAACCACCCCGGGGAGTGTGCCAATCTTGCAACCCGAGGAGACCGTGTTCGT
CGGGGTCACCATGGTGGGCGAAACCAGCGAAGACGTGTTCATCTTAATGCGAAGATGCTG
GGCTACCCCTAACGAAGATCCGGACTCTGAGCCATACTATGACCTCATCACTGACAGGTG
TCCTGTGAAAGACGCCGTGCAGGGATCGTTGACTGTGACGCAGAATGGCATCGGGCAACA
GGCCTTGTGGCAAACAAAGGTGTTCCGATTCGTGGGAGACGGCGATTCTTACCAGAATGT
GTGGCTCCACTGCGACTTGACTCTGTGCGTTCAGCGGACTTGCGAACCGGCGTGCTCGGC
AAGGCGAAAGAGAAGCGTCGGCGATGGCGCGGAGCATAACATCGTGTCGGTCGGGCCCTT
CATGAAACAACCGAGACTACTGGAAGAGGAAAACTTCAACATCAACGAGGAGATCGTGAC
GGAAATTTTGATCAAAAATGAAAGCTCGCCCAAGTTAGACGAAGACGTGCGTCACCTGGA
CGACTCGGTTCGTAGGTTATCAGAGACCATGGAGAAGATCGTCAGCAAACTGGATGACAA
GCCTGGTGTTGAAAAACACAGCGATGACAAAGAATGGTATGAGGACCAAACGTTCATCAT
CATAGCGGCGGCTGTCGTGGCGTTTTGCGTGCTCTGTTTTGCTATCGCCCTCATCGCCGT
ATTGATGCGTTGGAAGAACAACACCGCGAGGCAAGGCGGAAATGTGACGCCTACGGGGAC
CATAAACAAAGGCTTCAATATCTAAT

InterProScan

ProSiteProfiles
ZP_dom (IPR001507) - T[34-305] 31.472
SMART
ZP_dom (IPR001507) - T[34-301] 1.2E-19
Pfam
ZP_dom (IPR001507) - T[35-299] 7.7E-42
ProSitePatterns
ZP_dom_CS (IPR017977) - T[200-240] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TECTA_HUMAN 27.445 % 105 4.43E-24
UROM_HUMAN 28.428 % 113 8.9E-27
GP2_HUMAN 27.018 % 96.3 2.68E-21