- Clone 'csef026o22' >
- Transcript 'Moocci.CG.ELv1_2.S61...' >
- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'NCBI:KH.XM_018815474...'
Transcript Model
Transcript Id
NCBI:KH.XM_018815474.1
Possible name(s)
LRP1; LRP2; SORL1
Gene model
Location
KhL154 [249,235 / 251,929]
Amino acid sequence
Length: 573
>KH.XP_018671019.1
MLMKFFIITSFRALFLFFTNEATGATNNINLCTNIYSFIEGSNCSCQSFPYACECHNLPG
GCRRISGVVPQCYTDEERCDSYNYCGDWSDEKNCSCTDEQFECACHKSVSGCQHDGSFIP
RCLKKTSLCDLINDCGDWSDEFNCSCPLGEAPCDCFYNDKGCQDQDNFPLCYLDSTRCDG
KNYCGDWSDEKNCTYDYECDCHQNDKPCAVESNGFYQREAKCDGYNDCGDWSDELNCSCN
TFRCACNNSGPGTVDGCLYQDRTIYRCYYSEWKCDNYNHCGDWSDEMNCSKCPQNRFECD
SPCQGKNCPPVDLEIPNCYYPYDQCDGFNRCTDWSDEKNCTCLNNQVKCGCLGQNINCTS
NLGCLSNYQILDGAINCADTSDESCEFRKIFLYGFVWLCRNFSAYEKFVTLRQLSLLTQP
ICHNVTTYSLTGGQNHEWWCHRIDTKPGVKFWDTAQCDNGQFIEGIAFCGGITKCTDGSD
QRRNVPGFKCKAKVIYKQKTESCVLPQINLYNSLTYCADDSDNCFTDGKLKCFKCLDGKL
LISPNQVCDGIVDCYDLSDECLCSDQEVFIQYL
Nucleotide sequence
Length: 1,722
>NCBI:KH.XM_018815474.1
ATGCTGATGAAATTCTTTATTATTACAAGCTTCAGAGCTTTGTTTCTGTTTTTCACCAAT
GAAGCTACAGGTGCAACAAACAACATAAATCTCTGCACCAATATTTATTCATTCATTGAG
GGCTCCAACTGTTCTTGTCAGAGCTTCCCTTATGCATGTGAGTGCCACAATTTACCTGGT
GGTTGCAGACGCATATCTGGAGTTGTTCCGCAATGCTACACTGATGAGGAACGATGTGAC
AGTTACAACTATTGTGGTGATTGGAGCGATGAAAAAAACTGTTCATGTACAGATGAACAG
TTTGAATGTGCCTGTCATAAAAGTGTTAGTGGTTGCCAACATGATGGCAGTTTCATTCCA
CGCTGTTTAAAAAAAACATCCCTGTGCGATTTAATTAACGACTGCGGCGATTGGAGTGAC
GAATTTAATTGCTCATGTCCTCTTGGGGAGGCTCCATGTGACTGTTTTTATAATGACAAA
GGTTGTCAAGACCAAGATAACTTTCCACTTTGTTATTTGGATTCAACTCGCTGCGATGGT
AAAAATTACTGTGGTGATTGGAGTGATGAAAAGAACTGCACCTACGATTATGAATGTGAT
TGTCATCAAAATGATAAACCCTGTGCAGTAGAAAGTAATGGCTTTTATCAAAGAGAGGCT
AAATGCGATGGCTATAATGATTGTGGGGATTGGAGTGACGAACTTAACTGTAGTTGCAAC
ACATTTCGGTGTGCGTGTAACAACAGTGGTCCTGGTACAGTTGATGGTTGCCTATACCAA
GACCGTACAATCTATCGATGTTATTATTCTGAGTGGAAATGTGACAACTACAACCATTGC
GGAGATTGGAGTGACGAAATGAACTGCTCAAAATGTCCTCAGAATAGGTTTGAATGCGAC
AGTCCATGTCAGGGTAAAAATTGCCCTCCTGTAGACTTGGAAATACCAAACTGTTATTAT
CCGTATGATCAATGTGATGGATTTAACCGTTGTACCGATTGGAGTGACGAAAAAAACTGT
ACCTGTTTGAATAATCAGGTAAAGTGTGGATGCCTTGGCCAGAACATCAACTGTACTTCT
AACCTGGGTTGCCTTTCAAATTATCAAATACTGGATGGGGCAATCAATTGTGCTGATACC
TCTGATGAGTCTTGTGAATTCAGGAAAATATTCTTGTATGGTTTTGTATGGCTCTGTAGA
AACTTCTCTGCTTATGAAAAATTTGTAACTTTGAGACAACTAAGCCTTCTTACTCAACCT
ATATGCCATAACGTTACAACCTATTCATTGACTGGTGGTCAAAATCATGAATGGTGGTGT
CACCGCATAGATACTAAGCCAGGTGTAAAATTTTGGGACACTGCTCAGTGTGATAATGGA
CAATTTATAGAAGGTATTGCATTTTGTGGTGGAATTACAAAATGTACTGATGGAAGTGAT
CAAAGAAGAAATGTTCCAGGTTTTAAATGTAAAGCCAAAGTAATCTACAAACAAAAAACA
GAATCTTGTGTTTTACCTCAAATCAATCTTTATAATTCGTTGACCTATTGTGCAGATGAT
TCAGATAACTGTTTCACAGATGGAAAACTGAAATGTTTCAAGTGTTTAGATGGAAAGTTG
TTGATATCCCCAAACCAAGTTTGCGATGGAATAGTAGATTGCTATGATTTATCTGATGAA
TGTTTATGTTCTGACCAAGAAGTTTTTATCCAGTATTTGTAA
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[45-95] 9.075 - T[95-145] 10.675 - T[154-194] 9.35 - T[192-238] 9.6 - T[236-290] 9.988 - T[291-341] 9.738 - T[523-564] 8.613 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[70-91] 2.0E-25 - T[120-141] 2.0E-25 - T[169-190] 2.0E-25 - T[213-234] 2.0E-25 - T[265-286] 2.0E-25 - T[316-337] 2.0E-25 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[104-146] 7.98E-5 - T[201-245] 3.4E-5 - T[266-290] 9.03E-5 - T[532-563] 3.53E-5 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[104-146] 0.061 - T[154-195] 0.091 - T[200-239] 0.0089 - T[256-291] 0.0025 - T[302-342] 0.13 - T[350-387] 0.12 - T[523-565] 0.02 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[266-289] 0.00194571 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SORL_HUMAN | 32.836 % | 84.7 | 5.52E-17 |