- Transcript 'KH2012:KH.C4.547.v1....' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Molecular Tool 'Gata.a-MO (Bertrand 2003)' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'NCBI:KH.XM_018812745...'
Transcript Model
Transcript Id
NCBI:KH.XM_018812745.1
Possible name(s)
SLCO1C1; SLCO2A1; SLCO2B1
Gene model
Location
KhC8 [1,779,235 / 1,785,272]
Amino acid sequence
Length: 704
>KH.XP_018668290.1
MAEKPETSPLLRDRRYDRAYYRNGPDDEQTVTLQSGVLENSNKPERRRERTISSLAPIPP
SCYNINTFTIFLVCFQLLNLLTLTYTDSVINYITKRFKIPHTLAAFIPSSYEFGSMLIMI
PVAYVGDRWNRPKVIAIGVIVMIIGLGFCILPHFILPAPASHNSTVTYLCQPQIVANTKK
PITLPHHSTCTKKHSTIYNPSLLLMIGHVFVGLGSAPIGPLGLSFIDDHVLQSKAPIYLG
IYVGTSLLGPVLGFLLGSVTSKVYVTTSKFGNEINSGNPDWIGAWWLGYVIIICLMLFLL
FPFYFYPRYLPVSEEKEEEIMAIRKESLRRHGADAQTSTENSTFPCTEENSSASISSKNL
ICAIQRTLVTPFVFSAILAYIAMANLLGGMSTFGPTYVQRMFNVQRTTADLLIGGVCIPM
GVMATILSGYVIKKYNFDLRKTLLLIIVFSGAACIFFATLFLFGCKDLTVVGINKPFHSQ
TNVSLCSSQCGCPKDQFKVVCGSNKLNYISPCSAGCAASHLAPKSSNLLQQKTIYTNCSC
IPGKSNTAVSGTCTTTQCVGVLAGFLVCGSISVACYCFCQAPVYVMLLRVLETQDKALGI
GLLAFASRLLGYIPGPIWFGILVDRSCKYHENKCGSKALCRLYNKYGLRLSFIGLSLACG
MTYMLVFVATFAWMECHKNIYKTAVIYHGKSEDLLLGKTEENES
Nucleotide sequence
Length: 2,917
>NCBI:KH.XM_018812745.1
ATGGCGGAAAAACCTGAAACTTCTCCATTACTTAGAGACCGTCGTTACGACCGAGCATAT
TACCGAAATGGTCCAGATGATGAGCAAACAGTAACGCTCCAGTCAGGTGTTTTGGAAAAC
TCGAATAAACCAGAGCGTCGACGTGAAAGAACGATTTCTTCTCTTGCACCGATTCCACCT
TCTTGCTACAATATCAACACCTTTACTATATTTCTCGTCTGCTTCCAACTGCTCAATTTA
CTTACACTTACCTACACCGACAGCGTGATAAACTACATAACCAAGCGTTTTAAAATCCCA
CATACGTTGGCCGCCTTTATTCCAAGCAGTTACGAGTTCGGTTCAATGTTAATCATGATT
CCCGTTGCCTACGTTGGAGATAGATGGAACAGACCCAAAGTAATCGCTATTGGTGTAATC
GTAATGATCATTGGTCTTGGTTTTTGTATTCTTCCACATTTCATTCTTCCTGCACCTGCT
TCTCACAACTCAACCGTGACGTACTTGTGCCAGCCGCAGATCGTCGCTAATACTAAAAAG
CCAATCACTTTACCACACCATTCCACATGCACTAAAAAGCACTCAACGATATACAACCCA
TCCCTACTTCTAATGATAGGGCACGTCTTCGTCGGTCTTGGCTCGGCACCGATTGGACCA
CTCGGTCTGTCCTTTATTGACGATCACGTGCTACAGAGCAAAGCACCAATATATCTTGGC
ATCTATGTTGGAACATCTTTGTTGGGTCCAGTGTTAGGATTCTTACTCGGGAGTGTAACT
TCAAAAGTGTACGTGACAACCTCTAAGTTTGGAAATGAAATTAACTCCGGTAATCCAGAT
TGGATAGGAGCTTGGTGGCTCGGTTACGTCATTATAATTTGTCTCATGCTGTTCTTGCTC
TTTCCTTTCTATTTCTACCCACGGTATCTTCCAGTTTCGGAGGAAAAGGAAGAAGAAATT
ATGGCGATCAGAAAAGAAAGTCTAAGAAGACATGGTGCTGATGCGCAAACGTCTACAGAA
AACAGCACATTTCCGTGCACCGAAGAGAACAGCAGCGCTTCAATCTCGAGCAAAAACCTA
ATATGCGCTATCCAGAGAACGCTTGTAACGCCTTTTGTGTTTTCTGCCATACTCGCATAC
ATTGCAATGGCGAATCTTTTGGGAGGAATGTCGACATTTGGCCCAACTTATGTGCAACGG
ATGTTTAATGTACAGAGAACAACTGCGGATTTACTAATCGGCGGTGTTTGCATTCCCATG
GGGGTAATGGCCACCATATTAAGCGGTTACGTAATCAAGAAATACAATTTCGATTTGCGA
AAGACACTTCTGTTGATCATCGTTTTCTCTGGGGCAGCTTGCATTTTCTTTGCAACTCTC
TTTCTTTTCGGTTGTAAAGATTTGACCGTAGTTGGCATAAACAAGCCATTTCACAGCCAG
ACCAACGTATCCTTGTGCAGTTCTCAGTGTGGTTGTCCCAAGGATCAATTTAAAGTAGTT
TGTGGTTCCAACAAGTTGAATTACATCTCACCGTGTTCGGCCGGGTGTGCGGCAAGCCAT
CTAGCACCGAAAAGCAGCAACCTGCTTCAGCAGAAAACGATTTACACGAATTGCAGTTGT
ATACCTGGCAAGTCAAACACCGCTGTCAGTGGTACGTGCACAACTACACAATGTGTAGGA
GTACTTGCTGGATTTCTGGTGTGCGGTTCTATTTCAGTGGCATGTTATTGCTTCTGCCAA
GCTCCTGTATACGTTATGCTGCTACGAGTGTTGGAAACGCAAGATAAAGCGCTTGGTATT
GGACTTCTTGCTTTTGCATCACGGTTACTTGGCTACATTCCAGGACCGATTTGGTTTGGT
ATTCTGGTAGATCGAAGTTGCAAGTACCATGAGAACAAGTGTGGCTCAAAAGCGTTGTGT
CGACTTTACAATAAGTATGGACTCCGCCTAAGTTTCATAGGACTTAGTCTAGCTTGTGGA
ATGACGTACATGCTGGTTTTTGTTGCCACATTTGCTTGGATGGAATGTCACAAGAACATA
TACAAAACCGCAGTAATTTACCATGGAAAGTCAGAGGACTTGTTGCTTGGTAAAACAGAA
GAAAATGAAAGCTGAACTTTTGTCTAAATCCTCAATGCCTATGCCTTCTTTTTTTAAATA
AGATATTTTCATTTTTCCTTTTAGACAGTTTGTGCGTGGTAAAGAAACGAATGCATTTGA
GATGCTATGCAAACATGATTAAGCCAACAGTGTTTAGAAACGTTTTCCATCTTTTCTTGG
TTAAGAATTTCCACAAAAAGATAATCGTGACGAAAAAAATAACTTAATACTTTATTAGCA
AAAGTGGGTACGCAGAATAATCTCAAACGTCCATCGGTTGCAAAAATACTGCCATTGAAA
AAAGAAAAAAAATCGATCGGTTTGCTGGCAGCAAACAAACGAAAGCGGCGCTACTGGCAA
TGAGCAGCGGCTGGTTATTGCACTTGCCCTATGCGGCGACACAGTGGCACCACAGTCAAA
ATACGTGCCCATTAAACTCCCAAGTGGTTCGCACGTCGGTGCGCCATTGGTCGATTTAAA
TAATAGACACACAGCGTCGCCCAATCAGAGGTGAGATCTCACGGTGACGAAAAATGAGGA
ATGTGAGAAATTAACAGGACGTGAAAAAAAATATGTAAAACCGTTACATAGACAGCGTAA
ACGGCAGTATAGTACTACCCGAAGCACATATTATGTTTTAAAGAAAATTTCGTATTATTT
TTAAATGTGTAAAGTAACGGTTGGTCGCAGTGTTCACCATGGAACTGCATCTATACACGC
AGCTATTAAAAGATCATCAGAATATGAGATATTGCACGAAAAGAGAAACTATTTTTAAAC
TATCCAGCAGAAAGTGAAACGACCACGATCAACCGGA
| PANTHER |
OATP (IPR004156) - T[37-649] 2.0E-249 |
| SUPERFAMILY |
MFS_trans_sf (IPR036259) - T[50-156] 3.53E-34 - T[204-465] 3.53E-34 - T[567-668] 3.53E-34 |
| TIGRFAM |
OATP (IPR004156) - T[64-668] 3.9E-125 |
| Pfam |
OATP (IPR004156) - T[68-646] 4.6E-128 |
| ProSiteProfiles |
MFS_dom (IPR020846) - T[68-674] 8.506 |
| CDD |
MFS_dom (IPR020846) - T[88-464] 1.59057E-8 |
| SUPERFAMILY |
Kazal_dom_sf (IPR036058) - T[475-520] 1.73E-6 |
| ProSiteProfiles |
Kazal_dom (IPR002350) - T[480-542] 8.85 |
| Pfam |
Kazal_dom (IPR002350) - T[488-540] 2.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SO1C1_HUMAN | 27.735 % | 285 | 4.46E-86 |
| SO1A2_HUMAN | 28.271 % | 268 | 3.19E-80 |
| SO2A1_HUMAN | 28.776 % | 273 | 2.84E-82 |