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TRANSCRIPT CARD

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  1. Clone 'cieg084e19' > 
  2. Clone 'cscl042g24' > 
  3. Clone 'cilv002h11' > 
  4. Clone 'cilv039i12' > 
  5. Transcript 'KH2012:KH.S762.5.v1....'

Transcript Model

Transcript Id

KH2012:KH.S762.5.v1.A.ND1-1

Possible name(s)

RABGAP1; TBC1D19; TBC1D7

Gene model

KH2012:KH.S762.5

Location

KhS762 [10,608 / 17,578]

Sequences

Amino acid sequence

Length: 536

>KH.S762.5.v1.A.ND1-1
CNNRMASNNVSEVAALITEIICNLNGSTLQAQLKRAAQKEVEKPTVTSATLKSDIISSLK
TSGWEKILRNEIYKQINCIPKCFDSSIPFECQKEPLMYMRKAQANWEKRILKSMNSMCTE
LSIPLARKRPADEQRDLLHKWNEMGTDEPDLSHFRPVYAPKDFLEVISSVRNPNYRSLYG
HESEEYPEVCSEHWGLIQVPLEVPKLTELQAKFSEFCSSLPQGGIDDSVDAPTESFQNER
NRIARRVLDEKRGVLAQHFCRRGCPSGNRAEMWQLALGVTVDHLAILKYDQLKGYVLQHD
LLVDSLIYKDVKLTSVNDDYYFVFEDYLYQVLLVFSRDTTVLDHFVHSSASPPKSYIRGK
LGLEEFSVIYPPNGVIPFHGFSMYATPLCYLYSEPIRLYYMFREMYTRYFHRLHSISSHP
QGIISLCLLFESTLQSTHPRLFRHLQEIGCQPLKIAFKWLVRAFSGYLATEQLLLLWDRI
IGYGSLLILPLLAVAIFLFRQSNLLLITSASGVEGSLADITTLHVVPLLQLILFPT

Nucleotide sequence

Length: 1,856

>KH2012:KH.S762.5.v1.A.ND1-1
GTGCTATAAGCCGCTTTATTTTCGAGTATTGCAACATAATGTAATAATAGGATGGCTAGC
AATAATGTAAGTGAGGTTGCCGCCTTAATAACAGAAATTATTTGCAACCTAAATGGCAGC
ACTCTACAGGCACAACTAAAACGTGCAGCTCAGAAAGAGGTAGAAAAGCCCACAGTCACA
TCTGCCACTCTGAAATCGGATATCATTAGTTCATTAAAAACATCGGGGTGGGAAAAAATC
TTACGGAATGAAATCTACAAGCAAATAAACTGTATTCCAAAATGCTTTGATAGCTCTATC
CCTTTTGAATGTCAGAAAGAACCTCTTATGTATATGAGGAAAGCTCAAGCAAATTGGGAG
AAGCGAATATTAAAGAGTATGAACAGCATGTGCACTGAACTAAGCATTCCTCTTGCTCGT
AAACGACCCGCTGATGAACAAAGAGATTTACTTCATAAATGGAATGAAATGGGAACAGAT
GAGCCAGATTTAAGCCACTTTCGGCCTGTCTATGCTCCAAAAGATTTCTTGGAAGTTATT
TCAAGTGTCAGAAATCCCAACTATCGTAGTTTGTATGGTCATGAATCTGAAGAATATCCT
GAAGTATGTAGTGAACACTGGGGTCTTATACAAGTCCCATTGGAAGTCCCTAAACTTACA
GAACTGCAAGCGAAATTCTCAGAGTTTTGTTCCAGCCTTCCACAAGGAGGGATTGATGAC
AGTGTTGATGCCCCAACAGAATCCTTTCAAAATGAAAGGAACAGAATAGCAAGGAGAGTA
TTAGATGAAAAACGTGGAGTGCTAGCCCAACATTTCTGCAGACGAGGTTGTCCGAGTGGT
AATCGTGCCGAAATGTGGCAACTCGCACTAGGTGTCACTGTGGATCACTTGGCGATATTA
AAGTACGACCAACTGAAAGGTTATGTTCTGCAACATGATCTACTGGTTGACAGTTTAATT
TACAAGGACGTTAAACTGACTTCTGTGAATGATGATTATTACTTTGTGTTCGAGGATTAT
TTGTATCAAGTATTGCTTGTGTTTTCAAGGGACACGACTGTACTGGATCACTTTGTGCAC
AGTAGTGCTTCACCCCCTAAGTCTTATATTAGAGGAAAGCTTGGTCTTGAAGAATTTTCT
GTTATCTATCCTCCTAATGGTGTAATTCCTTTCCATGGTTTCTCCATGTATGCTACACCA
TTATGTTATCTCTACTCAGAACCTATTCGACTTTATTACATGTTTCGTGAGATGTATACG
AGATATTTTCACAGGTTACATTCAATATCTTCACACCCCCAGGGCATCATATCACTGTGT
TTGTTATTTGAATCAACCTTACAATCCACTCATCCAAGGTTATTTCGGCATCTTCAAGAA
ATAGGGTGCCAACCTTTAAAAATTGCGTTTAAATGGTTGGTTCGTGCGTTTTCTGGTTAC
CTGGCAACTGAACAACTCCTGTTACTATGGGATCGTATCATTGGATACGGAAGTTTGCTC
ATTCTTCCTCTTCTTGCTGTTGCTATTTTCCTCTTCCGTCAATCAAACCTTCTTCTCATA
ACATCTGCAAGTGGTGTTGAGGGTTCCTTAGCAGACATTACGACACTACATGTTGTTCCA
CTGTTACAACTCATACTCTTCCCAACTTAAAGAGTTTTAGTTTTTACAGGGTTAGGCAAG
GACAAACACTTCATTCAAAGTGTTGAAGTCGACCTCACAACAGATACCCACTGTGCCATA
CTTCATTGTACTTTATTATTCTTAGCATTCTCCAGAAACGCAGAATCGAAAGATGGCTTT
AACGTATACACGCTTATATAGAAGATGTTTTAAAATATAATTAACGCCAAAGCACC

InterProScan

SMART
Rab-GTPase-TBC_dom (IPR000195) - T[260-510] 5.7E-4
ProSiteProfiles
Rab-GTPase-TBC_dom (IPR000195) - T[263-484] 15.563
Pfam
Rab-GTPase-TBC_dom (IPR000195) - T[380-503] 3.4E-12
SUPERFAMILY
Rab-GTPase_TBC_sf (IPR035969) - T[421-514] 3.14E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBC19_HUMAN 60.837 % 636 0