- Transcript 'KH2012:KH.L96.18.v1....' >
- Clone 'cien228102' >
- EST 'FF933432.1' >
- Transcript 'KH2012:KH.S437.3.v2....'
Transcript Model
Transcript Id
KH2012:KH.S437.3.v2.A.SL2-1
Possible name(s)
ZKSCAN8; ZNF570; ZNF79
Gene model
Location
KhS437 [12,363 / 13,790]
Amino acid sequence
Length: 399
>KH.S437.3.v2.A.SL2-1
LKMADDEATPSVQDLEETLVMIGDKATTIVIDVNDGSYDDDQIFLEEVLQDDDGGEIKLE
GVSFEEAFKQHGRLTSVKMKQCFICSLAFESHARFVQHVKEVHPVKFRDGKFHCPVCNYS
NKTKPSVEQHLRVHTKEKPFQCQICGKAFNQKAGVVQHMRTHSDEKPYICGICDGRFKAH
GTLLAHIAMKHQNIKPYTCKECGYSFGHASNLRTHMRTHTGERPYKCNFCEKTFVQHGHC
VTHQRLHTGEKPFKCDYCHGAFTHVGNLRQHVISQHTKDYKHRCQYCNKGFIGPGDLRRH
ILTHSVVPVSMVTNMEEQMMQEIGEKEEQSVEHLEHGLEHVEQAGQVGPVGQVGQVRHNV
GHDMDPNIEEIIHEQSGPDSPELEIVQVGGTDLVEAETS
Nucleotide sequence
Length: 1,427
>KH2012:KH.S437.3.v2.A.SL2-1
ATTGAAAATGGCTGATGATGAAGCGACACCGAGTGTTCAAGATTTGGAGGAAACTTTGGT
AATGATCGGCGACAAAGCAACGACGATTGTGATTGATGTTAATGACGGCAGTTACGACGA
TGACCAAATATTCCTTGAGGAAGTTTTACAAGATGATGATGGAGGGGAGATCAAGTTGGA
GGGGGTCAGTTTCGAGGAAGCGTTCAAACAACATGGACGACTCACCTCGGTAAAGATGAA
ACAATGTTTTATTTGTTCGCTCGCGTTCGAATCCCATGCAAGGTTTGTTCAACACGTGAA
GGAGGTTCATCCCGTCAAGTTTAGAGATGGAAAGTTTCATTGCCCAGTTTGTAATTATTC
AAATAAAACGAAACCATCAGTCGAACAACATCTGAGGGTTCATACGAAAGAGAAACCGTT
TCAATGCCAAATTTGCGGGAAAGCTTTCAATCAAAAGGCTGGTGTTGTGCAGCATATGCG
AACACACTCTGATGAGAAACCTTATATTTGTGGGATTTGCGATGGTAGATTCAAAGCACA
CGGCACACTTCTTGCACACATTGCTATGAAACACCAGAATATTAAACCTTACACTTGCAA
GGAGTGCGGATATTCATTCGGGCACGCAAGTAACCTGCGTACACACATGCGAACCCACAC
AGGTGAACGGCCATATAAATGTAACTTCTGTGAGAAAACCTTCGTACAACACGGTCACTG
TGTCACCCACCAACGGCTCCACACTGGCGAGAAGCCGTTCAAGTGTGACTATTGTCACGG
TGCGTTCACGCACGTCGGAAATCTACGGCAACATGTGATCAGCCAACACACCAAGGATTA
TAAACATAGATGTCAATACTGCAACAAAGGGTTCATTGGACCAGGGGATCTGAGACGGCA
TATTCTCACACACTCCGTTGTCCCGGTTTCCATGGTTACCAACATGGAGGAACAGATGAT
GCAGGAGATTGGTGAGAAGGAGGAGCAAAGTGTGGAGCATCTGGAGCATGGTTTGGAACA
TGTAGAGCAGGCGGGGCAAGTTGGGCCAGTCGGGCAAGTTGGGCAGGTTAGGCATAATGT
GGGCCACGACATGGATCCGAACATTGAAGAAATCATCCACGAGCAGAGCGGACCCGACAG
TCCCGAGCTGGAGATTGTTCAAGTTGGTGGGACTGACTTGGTAGAAGCTGAGACTTCATA
AGGAAAAAAGACGTCGTGTTGATTCAAAGCAAACATATTGTTTGGATTGTGACATTGCTC
ATTCTAGACTTCCCAACATCATTGTTTGATTGTGATGTAACAATGGCAGGGAATATTGGG
TTCAAACTCTGAAATTAATAATGTCATATTTTGCATGCGTGTTTGTTGTTTAACGAGCGT
TTGGTTTAAGTTTTAGTGAATATTATTCCCATCTTGTTTTGTGTTAG
| SMART |
Znf_C2H2_type (IPR013087) - T[80-103] 0.91 - T[112-134] 0.0028 - T[140-162] 1.1E-4 - T[168-191] 0.39 - T[197-219] 1.6E-5 - T[225-247] 0.27 - T[253-276] 0.019 - T[282-304] 0.0011 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[82-103] . - T[142-162] . - T[199-219] . - T[227-247] . - T[255-276] . - T[284-304] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[111-143] 3.18E-6 - T[134-186] 3.53E-17 - T[205-262] 3.5E-20 - T[251-304] 6.87E-11 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[112-139] 12.071 - T[140-167] 16.041 - T[168-196] 9.785 - T[197-224] 17.558 - T[225-252] 15.396 - T[253-281] 10.263 - T[282-305] 9.847 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZKSC8_HUMAN | 40.323 % | 178 | 2.02E-50 |
| ZN570_HUMAN | 35.314 % | 172 | 1.88E-48 |
| ZNF79_HUMAN | 36.429 % | 167 | 5.85E-47 |