- Region 'REG00000363' >
- Transcript 'KH2012:KH.S437.3.v2....' >
- Transcript 'KH2012:KH.S437.3.v2....'
Transcript Model
Transcript Id
KH2012:KH.S437.3.v2.A.nonSL7-1
Possible name(s)
ZKSCAN8; ZNF570; ZNF79
Gene model
Location
KhS437 [12,363 / 13,730]
Amino acid sequence
Length: 379
>KH.S437.3.v2.A.nonSL7-1
MIGDKATTIVIDVNDGSYDDDQIFLEEVLQDDDGGEIKLEGVSFEEAFKQHGRLTSVKMK
QCFICSLAFESHARFVQHVKEVHPVKFRDGKFHCPVCNYSNKTKPSVEQHLRVHTKEKPF
QCQICGKAFNQKAGVVQHMRTHSDEKPYICGICDGRFKAHGTLLAHIAMKHQNIKPYTCK
ECGYSFGHASNLRTHMRTHTGERPYKCNFCEKTFVQHGHCVTHQRLHTGEKPFKCDYCHG
AFTHVGNLRQHVISQHTKDYKHRCQYCNKGFIGPGDLRRHILTHSVVPVSMVTNMEEQMM
QEIGEKEEQSVEHLEHGLEHVEQAGQVGPVGQVGQVRHNVGHDMDPNIEEIIHEQSGPDS
PELEIVQVGGTDLVEAETS
Nucleotide sequence
Length: 1,367
>KH2012:KH.S437.3.v2.A.nonSL7-1
AATGATCGGCGACAAAGCAACGACGATTGTGATTGATGTTAATGACGGCAGTTACGACGA
TGACCAAATATTCCTTGAGGAAGTTTTACAAGATGATGATGGAGGGGAGATCAAGTTGGA
GGGGGTCAGTTTCGAGGAAGCGTTCAAACAACATGGACGACTCACCTCGGTAAAGATGAA
ACAATGTTTTATTTGTTCGCTCGCGTTCGAATCCCATGCAAGGTTTGTTCAACACGTGAA
GGAGGTTCATCCCGTCAAGTTTAGAGATGGAAAGTTTCATTGCCCAGTTTGTAATTATTC
AAATAAAACGAAACCATCAGTCGAACAACATCTGAGGGTTCATACGAAAGAGAAACCGTT
TCAATGCCAAATTTGCGGGAAAGCTTTCAATCAAAAGGCTGGTGTTGTGCAGCATATGCG
AACACACTCTGATGAGAAACCTTATATTTGTGGGATTTGCGATGGTAGATTCAAAGCACA
CGGCACACTTCTTGCACACATTGCTATGAAACACCAGAATATTAAACCTTACACTTGCAA
GGAGTGCGGATATTCATTCGGGCACGCAAGTAACCTGCGTACACACATGCGAACCCACAC
AGGTGAACGGCCATATAAATGTAACTTCTGTGAGAAAACCTTCGTACAACACGGTCACTG
TGTCACCCACCAACGGCTCCACACTGGCGAGAAGCCGTTCAAGTGTGACTATTGTCACGG
TGCGTTCACGCACGTCGGAAATCTACGGCAACATGTGATCAGCCAACACACCAAGGATTA
TAAACATAGATGTCAATACTGCAACAAAGGGTTCATTGGACCAGGGGATCTGAGACGGCA
TATTCTCACACACTCCGTTGTCCCGGTTTCCATGGTTACCAACATGGAGGAACAGATGAT
GCAGGAGATTGGTGAGAAGGAGGAGCAAAGTGTGGAGCATCTGGAGCATGGTTTGGAACA
TGTAGAGCAGGCGGGGCAAGTTGGGCCAGTCGGGCAAGTTGGGCAGGTTAGGCATAATGT
GGGCCACGACATGGATCCGAACATTGAAGAAATCATCCACGAGCAGAGCGGACCCGACAG
TCCCGAGCTGGAGATTGTTCAAGTTGGTGGGACTGACTTGGTAGAAGCTGAGACTTCATA
AGGAAAAAAGACGTCGTGTTGATTCAAAGCAAACATATTGTTTGGATTGTGACATTGCTC
ATTCTAGACTTCCCAACATCATTGTTTGATTGTGATGTAACAATGGCAGGGAATATTGGG
TTCAAACTCTGAAATTAATAATGTCATATTTTGCATGCGTGTTTGTTGTTTAACGAGCGT
TTGGTTTAAGTTTTAGTGAATATTATTCCCATCTTGTTTTGTGTTAG
| SMART |
Znf_C2H2_type (IPR013087) - T[60-83] 0.91 - T[92-114] 0.0028 - T[120-142] 1.1E-4 - T[148-171] 0.39 - T[177-199] 1.6E-5 - T[205-227] 0.27 - T[233-256] 0.019 - T[262-284] 0.0011 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[62-83] . - T[122-142] . - T[179-199] . - T[207-227] . - T[235-256] . - T[264-284] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[91-123] 2.82E-6 - T[114-166] 3.49E-17 - T[185-242] 3.4E-20 - T[231-284] 6.42E-11 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[92-119] 12.071 - T[120-147] 16.041 - T[148-176] 9.785 - T[177-204] 17.558 - T[205-232] 15.396 - T[233-261] 10.263 - T[262-285] 9.847 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZKSC8_HUMAN | 40.323 % | 177 | 3.14E-50 |
| ZN570_HUMAN | 40.506 % | 171 | 2.94E-48 |
| ZNF79_HUMAN | 36.429 % | 167 | 4.64E-47 |