- Region 'REG00000363' >
- Transcript 'KH2012:KH.S437.3.v2....'
Transcript Model
Transcript Id
KH2012:KH.S437.3.v2.A.nonSL5-1
Possible name(s)
ZKSCAN8; ZNF570; ZNF79
Gene model
Location
KhS437 [12,363 / 13,674]
Amino acid sequence
Length: 360
>KH.S437.3.v2.A.nonSL5-1
DDQIFLEEVLQDDDGGEIKLEGVSFEEAFKQHGRLTSVKMKQCFICSLAFESHARFVQHV
KEVHPVKFRDGKFHCPVCNYSNKTKPSVEQHLRVHTKEKPFQCQICGKAFNQKAGVVQHM
RTHSDEKPYICGICDGRFKAHGTLLAHIAMKHQNIKPYTCKECGYSFGHASNLRTHMRTH
TGERPYKCNFCEKTFVQHGHCVTHQRLHTGEKPFKCDYCHGAFTHVGNLRQHVISQHTKD
YKHRCQYCNKGFIGPGDLRRHILTHSVVPVSMVTNMEEQMMQEIGEKEEQSVEHLEHGLE
HVEQAGQVGPVGQVGQVRHNVGHDMDPNIEEIIHEQSGPDSPELEIVQVGGTDLVEAETS
Nucleotide sequence
Length: 1,311
>KH2012:KH.S437.3.v2.A.nonSL5-1
ACGATGACCAAATATTCCTTGAGGAAGTTTTACAAGATGATGATGGAGGGGAGATCAAGT
TGGAGGGGGTCAGTTTCGAGGAAGCGTTCAAACAACATGGACGACTCACCTCGGTAAAGA
TGAAACAATGTTTTATTTGTTCGCTCGCGTTCGAATCCCATGCAAGGTTTGTTCAACACG
TGAAGGAGGTTCATCCCGTCAAGTTTAGAGATGGAAAGTTTCATTGCCCAGTTTGTAATT
ATTCAAATAAAACGAAACCATCAGTCGAACAACATCTGAGGGTTCATACGAAAGAGAAAC
CGTTTCAATGCCAAATTTGCGGGAAAGCTTTCAATCAAAAGGCTGGTGTTGTGCAGCATA
TGCGAACACACTCTGATGAGAAACCTTATATTTGTGGGATTTGCGATGGTAGATTCAAAG
CACACGGCACACTTCTTGCACACATTGCTATGAAACACCAGAATATTAAACCTTACACTT
GCAAGGAGTGCGGATATTCATTCGGGCACGCAAGTAACCTGCGTACACACATGCGAACCC
ACACAGGTGAACGGCCATATAAATGTAACTTCTGTGAGAAAACCTTCGTACAACACGGTC
ACTGTGTCACCCACCAACGGCTCCACACTGGCGAGAAGCCGTTCAAGTGTGACTATTGTC
ACGGTGCGTTCACGCACGTCGGAAATCTACGGCAACATGTGATCAGCCAACACACCAAGG
ATTATAAACATAGATGTCAATACTGCAACAAAGGGTTCATTGGACCAGGGGATCTGAGAC
GGCATATTCTCACACACTCCGTTGTCCCGGTTTCCATGGTTACCAACATGGAGGAACAGA
TGATGCAGGAGATTGGTGAGAAGGAGGAGCAAAGTGTGGAGCATCTGGAGCATGGTTTGG
AACATGTAGAGCAGGCGGGGCAAGTTGGGCCAGTCGGGCAAGTTGGGCAGGTTAGGCATA
ATGTGGGCCACGACATGGATCCGAACATTGAAGAAATCATCCACGAGCAGAGCGGACCCG
ACAGTCCCGAGCTGGAGATTGTTCAAGTTGGTGGGACTGACTTGGTAGAAGCTGAGACTT
CATAAGGAAAAAAGACGTCGTGTTGATTCAAAGCAAACATATTGTTTGGATTGTGACATT
GCTCATTCTAGACTTCCCAACATCATTGTTTGATTGTGATGTAACAATGGCAGGGAATAT
TGGGTTCAAACTCTGAAATTAATAATGTCATATTTTGCATGCGTGTTTGTTGTTTAACGA
GCGTTTGGTTTAAGTTTTAGTGAATATTATTCCCATCTTGTTTTGTGTTAG
| SMART |
Znf_C2H2_type (IPR013087) - T[41-64] 0.91 - T[73-95] 0.0028 - T[101-123] 1.1E-4 - T[129-152] 0.39 - T[158-180] 1.6E-5 - T[186-208] 0.27 - T[214-237] 0.019 - T[243-265] 0.0011 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[43-64] . - T[103-123] . - T[160-180] . - T[188-208] . - T[216-237] . - T[245-265] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[72-104] 2.6E-6 - T[95-147] 3.16E-17 - T[166-223] 3.24E-20 - T[212-265] 5.99E-11 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[73-100] 12.071 - T[101-128] 16.041 - T[129-157] 9.785 - T[158-185] 17.558 - T[186-213] 15.396 - T[214-242] 10.263 - T[243-266] 9.847 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZKSC8_HUMAN | 40.323 % | 176 | 3.78E-50 |
| ZN570_HUMAN | 40.506 % | 170 | 2.55E-48 |
| ZN135_HUMAN | 40.084 % | 168 | 7.82E-47 |