- >
- Region 'REG00000035' >
- Region 'REG00001590' >
- Transcript 'KH2012:KH.S390.6.v2....'
Transcript Model
Transcript Id
KH2012:KH.S390.6.v2.A.SL1-1
Possible name(s)
ITGB1; ITGB5; ITGB6
Gene model
Location
KhS390 [40,011 / 48,164]
Amino acid sequence
Length: 773
>KH.S390.6.v2.A.SL1-1
CRKTLQASACATADITMPRSDVIFQKNLPFSSRDDINVVQLRPQNININLRKGDTVKFNV
TFRKVKDYPVDLYYVMDLSNSMKDDLAELQKLGARLAEEIRQNVTSDINMGFGTFVDKVM
MPFTSTVPDQLKNPCVKADEFCSAPFGFRHQQPISGDLTAFKESVQNTNISGNIDSPEGG
FDALMQIAVCGNKIGWRESASHLVVFTTDASFHTALDGKLAAILDANDMQCHLTKVNSSV
DSNVYVYDKSKELDYPSIGQLRAAFVANKIQPIFAVTKEVRSLYDGLKSLIPNSFVDELA
NDSNNIISIIKTAYNKLKEKLQMSLDDDNKPTGVGISYRTLCPTAGGWAENSLSCDQIKI
GSEVTYEFTISASSCPATLPSQPMTFTSSSLQEFVKFNFNFLCDCNCSSMAEVDSPSCST
NGSLVCGACLCNDGHEGSRCQCTQSTIGLSLNAQCKRSDTADICERNGRCVCGVCDCDEN
YHGKYCQCTNTGCPVTDGNVCGVGGKCENCYNQPKCNCTSKNGIPYTLDNVGSCTCHESE
CIDQRSNNTMVCSGNGNCSCSSCICDPKYDGIYCQHCNSPSCKTITAECSSHEACAICVN
AAVQNRENANDLCQVQCKDVTFQTVKAIPDCSVCTANSGVTCPSDCADVDPSVLTPTPCS
QAQSTGQCKVSYNIVWKKSLRNYLVLIKEFDQAIDCPKPINPLVIVLPIVAGIVILGLIA
LVAWKVYQTWRDKREWKVFENEMKKSKWTKDINPVFQKPKTRFENPAYGGDEQ
Nucleotide sequence
Length: 2,688
>KH2012:KH.S390.6.v2.A.SL1-1
ATTTGAATTGGTTTGAATATTCATTCATCCTGATTATTACGTCACAATGATATGTTTGTT
AACCTCATAATGTTTAATTGATGATTCATAATGTTAACTATTGATCTGTGACGTCATAAT
GCAGAAAAACTTTACAAGCAAGCGCGTGTGCGACTGCTGACATCACAATGCCTAGAAGTG
ACGTCATATTCCAGAAGAACTTACCGTTCAGTTCCCGTGACGACATCAATGTTGTTCAAC
TTCGTCCGCAGAATATTAACATTAATTTACGGAAAGGCGACACGGTGAAGTTCAACGTGA
CTTTCCGCAAAGTCAAGGATTACCCGGTTGATCTTTATTACGTCATGGACCTCTCAAACT
CGATGAAGGATGATTTGGCGGAGTTACAAAAACTTGGAGCAAGGTTGGCGGAGGAGATTC
GACAAAACGTCACAAGCGACATCAATATGGGGTTTGGCACCTTCGTTGATAAAGTTATGA
TGCCGTTCACCAGCACTGTACCTGACCAGTTGAAGAACCCGTGCGTTAAAGCTGATGAAT
TTTGTTCCGCACCTTTTGGCTTTCGTCATCAACAACCGATATCTGGCGACCTCACAGCGT
TCAAGGAGAGCGTTCAGAACACCAACATATCCGGCAACATCGATTCCCCCGAGGGTGGGT
TCGATGCCTTGATGCAAATCGCTGTGTGCGGGAACAAGATCGGGTGGCGAGAATCGGCTT
CGCATCTCGTGGTGTTCACAACTGATGCGTCCTTCCATACAGCATTGGACGGGAAGTTGG
CCGCCATATTGGATGCGAATGATATGCAGTGTCACCTTACTAAGGTGAACTCGAGCGTCG
ACAGCAACGTTTATGTTTACGACAAAAGCAAGGAGTTGGACTATCCATCCATCGGCCAAC
TACGCGCGGCGTTCGTTGCGAATAAGATTCAACCGATATTCGCTGTAACAAAGGAAGTCA
GAAGCCTTTATGACGGTTTGAAAAGTCTCATTCCAAACTCGTTCGTCGATGAATTGGCCA
ACGACTCCAACAATATTATCTCCATTATAAAGACGGCTTACAATAAACTGAAGGAGAAGT
TACAAATGTCGCTCGATGACGACAACAAACCGACAGGGGTTGGGATATCGTACAGAACTT
TGTGCCCAACCGCTGGTGGGTGGGCTGAGAATAGTTTAAGTTGCGACCAGATCAAGATTG
GAAGCGAGGTGACTTACGAGTTCACAATATCCGCATCATCTTGCCCGGCCACCCTCCCAT
CACAACCAATGACGTTTACGTCGAGTTCACTTCAAGAATTTGTTAAATTTAACTTCAACT
TCTTGTGCGATTGCAACTGCTCCAGCATGGCTGAGGTTGACAGTCCAAGTTGCAGCACCA
ATGGTTCCCTTGTATGCGGAGCATGCTTGTGTAATGATGGACACGAAGGTTCAAGATGTC
AATGCACGCAAAGCACCATCGGGTTGTCGCTCAACGCCCAATGTAAACGAAGCGACACCG
CTGATATTTGCGAACGGAATGGTCGATGTGTTTGTGGTGTTTGTGATTGTGATGAAAACT
ACCACGGTAAATACTGTCAATGTACCAATACTGGATGTCCGGTCACCGATGGCAACGTGT
GCGGTGTTGGTGGCAAGTGTGAGAATTGTTACAACCAACCTAAGTGTAACTGCACCTCCA
AGAATGGGATTCCATACACCTTGGATAACGTTGGTTCATGTACTTGCCATGAAAGTGAAT
GCATCGACCAGAGGAGCAACAACACGATGGTTTGCAGCGGGAATGGGAATTGTTCATGCA
GTAGTTGTATTTGTGACCCTAAATACGATGGTATATATTGTCAACATTGCAACAGTCCAT
CGTGCAAAACCATCACCGCTGAATGTTCGTCCCATGAAGCTTGCGCTATATGTGTTAACG
CTGCTGTGCAGAACCGAGAGAACGCCAACGATTTATGCCAAGTTCAATGTAAAGACGTCA
CCTTCCAAACTGTGAAAGCGATTCCCGATTGTTCGGTTTGTACCGCTAATAGTGGTGTGA
CGTGTCCATCTGATTGTGCTGACGTCGATCCTTCTGTATTGACCCCAACTCCATGCTCCC
AAGCTCAATCAACCGGTCAATGCAAGGTCTCTTACAATATCGTGTGGAAGAAATCACTTC
GTAATTACCTGGTGTTGATCAAAGAATTCGACCAAGCTATTGATTGCCCGAAACCGATCA
ACCCGTTAGTTATCGTCCTCCCCATCGTAGCCGGCATCGTCATCCTTGGCTTGATCGCCC
TTGTAGCTTGGAAGGTTTACCAAACTTGGAGAGATAAGAGAGAATGGAAAGTTTTCGAGA
ACGAGATGAAGAAATCGAAGTGGACGAAGGACATTAACCCGGTGTTCCAAAAACCTAAGA
CTCGGTTTGAGAATCCAGCGTACGGTGGGGATGAACAATAATGAACACACTACTTCGTAT
TTAAACTGATTAAATATGTTGCTTGAATGGCGTTAATGTATCGAGTTTTGAATTATTAAT
GTAAATATGCTAAAACGTGGCTTTGAGTGTATATTTTACTAACTATGACACCAAAACATA
CTTTGGTAATTAAAGCTACCAACATTAGTATTTCAGCAATTAACTCTCTTGCTTGTTTGC
TTTTACTATTTCTTCTCGGAAACACTGCATTTTGGCAACATTTCGCAG
| PIRSF |
Integrin_bsu (IPR015812) - T[1-772] 3.1E-205 |
| SMART |
Integrin_bsu_VWA (IPR002369) - T[1-405] 4.4E-141 |
| PANTHER |
Integrin_bsu (IPR015812) - T[2-772] 6.7E-208 |
| PRINTS |
Integrin_bsu (IPR015812) - T[40-53] 1.5E-74 - T[68-86] 1.5E-74 - T[109-128] 1.5E-74 - T[142-161] 1.5E-74 - T[175-197] 1.5E-74 - T[202-217] 1.5E-74 - T[290-314] 1.5E-74 - T[552-565] 1.5E-74 - T[700-717] 1.5E-74 - T[717-735] 1.5E-74 - T[752-762] 1.5E-74 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[65-321] 5.8E-144 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[65-318] 3.81E-71 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[66-320] 1.1E-101 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[323-408] 6.8E-8 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[552-565] . |
| SMART |
Integrin_bsu_cyt_dom (IPR014836) - T[725-771] 4.1E-18 |
| Pfam |
Integrin_bsu_cyt_dom (IPR014836) - T[725-769] 2.1E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 34.447 % | 421 | 9.5E-136 |
| ITB6_HUMAN | 34.018 % | 425 | 1.37E-137 |
| ITB1_HUMAN | 34.975 % | 446 | 1.11E-145 |