- Transcript 'KH2012:KH.C1.508.v3....' >
- Transcript 'KH2012:KH.C8.859.v1....' >
- Region 'REG00000038' >
- Transcript 'KH2012:KH.S390.6.v1....'
Transcript Model
Transcript Id
KH2012:KH.S390.6.v1.A.SL2-1
Possible name(s)
ITGB1; ITGB5; ITGB6
Gene model
Location
KhS390 [39,484 / 48,164]
Amino acid sequence
Length: 848
>KH.S390.6.v1.A.SL2-1
TVVHCTLNMERIKLFMLFAVLVVYSTQVSGQSTTDIDKLCEDTAITSCDQCIRKHPQCAW
CSRTSDNSNIKRCRSYTKTLQASACATADITMPRSDVIFQKNLPFSSRDDINVVQLRPQN
ININLRKGDTVKFNVTFRKVKDYPVDLYYVMDLSNSMKDDLAELQKLGARLAEEIRQNVT
SDINMGFGTFVDKVMMPFTSTVPDQLKNPCVKADEFCSAPFGFRHQQPISGDLTAFKESV
QNTNISGNIDSPEGGFDALMQIAVCGNKIGWRESASHLVVFTTDASFHTALDGKLAAILD
ANDMQCHLTKVNSSVDSNVYVYDKSKELDYPSIGQLRAAFVANKIQPIFAVTKEVRSLYD
GLKSLIPNSFVDELANDSNNIISIIKTAYNKLKEKLQMSLDDDNKPTGVGISYRTLCPTA
GGWAENSLSCDQIKIGSEVTYEFTISASSCPATLPSQPMTFTSSSLQEFVKFNFNFLCDC
NCSSMAEVDSPSCSTNGSLVCGACLCNDGHEGSRCQCTQSTIGLSLNAQCKRSDTADICE
RNGRCVCGVCDCDENYHGKYCQCTNTGCPVTDGNVCGVGGKCENCYNQPKCNCTSKNGIP
YTLDNVGSCTCHESECIDQRSNNTMVCSGNGNCSCSSCICDPKYDGIYCQHCNSPSCKTI
TAECSSHEACAICVNAAVQNRENANDLCQVQCKDVTFQTVKAIPDCSVCTANSGVTCPSD
CADVDPSVLTPTPCSQAQSTGQCKVSYNIVWKKSLRNYLVLIKEFDQAIDCPKPINPLVI
VLPIVAGIVILGLIALVAWKVYQTWRDKREWKVFENEMKKSKWTKDINPVFQKPKTRFEN
PAYGGDEQ
Nucleotide sequence
Length: 2,794
>KH2012:KH.S390.6.v1.A.SL2-1
ACTGTTGTTCATTGTACGTTGAATATGGAAAGAATAAAGTTGTTTATGTTGTTTGCTGTG
TTGGTTGTATATTCCACACAAGTGTCAGGACAAAGTACCACCGATATCGATAAATTATGC
GAAGACACGGCAATAACATCATGCGACCAATGTATACGAAAGCATCCACAGTGCGCTTGG
TGCAGTCGAACAAGTGATAACTCGAATATTAAGCGATGTAGAAGTTACACAAAAACTTTA
CAAGCAAGCGCGTGTGCGACTGCTGACATCACAATGCCTAGAAGTGACGTCATATTCCAG
AAGAACTTACCGTTCAGTTCCCGTGACGACATCAATGTTGTTCAACTTCGTCCGCAGAAT
ATTAACATTAATTTACGGAAAGGCGACACGGTGAAGTTCAACGTGACTTTCCGCAAAGTC
AAGGATTACCCGGTTGATCTTTATTACGTCATGGACCTCTCAAACTCGATGAAGGATGAT
TTGGCGGAGTTACAAAAACTTGGAGCAAGGTTGGCGGAGGAGATTCGACAAAACGTCACA
AGCGACATCAATATGGGGTTTGGCACCTTCGTTGATAAAGTTATGATGCCGTTCACCAGC
ACTGTACCTGACCAGTTGAAGAACCCGTGCGTTAAAGCTGATGAATTTTGTTCCGCACCT
TTTGGCTTTCGTCATCAACAACCGATATCTGGCGACCTCACAGCGTTCAAGGAGAGCGTT
CAGAACACCAACATATCCGGCAACATCGATTCCCCCGAGGGTGGGTTCGATGCCTTGATG
CAAATCGCTGTGTGCGGGAACAAGATCGGGTGGCGAGAATCGGCTTCGCATCTCGTGGTG
TTCACAACTGATGCGTCCTTCCATACAGCATTGGACGGGAAGTTGGCCGCCATATTGGAT
GCGAATGATATGCAGTGTCACCTTACTAAGGTGAACTCGAGCGTCGACAGCAACGTTTAT
GTTTACGACAAAAGCAAGGAGTTGGACTATCCATCCATCGGCCAACTACGCGCGGCGTTC
GTTGCGAATAAGATTCAACCGATATTCGCTGTAACAAAGGAAGTCAGAAGCCTTTATGAC
GGTTTGAAAAGTCTCATTCCAAACTCGTTCGTCGATGAATTGGCCAACGACTCCAACAAT
ATTATCTCCATTATAAAGACGGCTTACAATAAACTGAAGGAGAAGTTACAAATGTCGCTC
GATGACGACAACAAACCGACAGGGGTTGGGATATCGTACAGAACTTTGTGCCCAACCGCT
GGTGGGTGGGCTGAGAATAGTTTAAGTTGCGACCAGATCAAGATTGGAAGCGAGGTGACT
TACGAGTTCACAATATCCGCATCATCTTGCCCGGCCACCCTCCCATCACAACCAATGACG
TTTACGTCGAGTTCACTTCAAGAATTTGTTAAATTTAACTTCAACTTCTTGTGCGATTGC
AACTGCTCCAGCATGGCTGAGGTTGACAGTCCAAGTTGCAGCACCAATGGTTCCCTTGTA
TGCGGAGCATGCTTGTGTAATGATGGACACGAAGGTTCAAGATGTCAATGCACGCAAAGC
ACCATCGGGTTGTCGCTCAACGCCCAATGTAAACGAAGCGACACCGCTGATATTTGCGAA
CGGAATGGTCGATGTGTTTGTGGTGTTTGTGATTGTGATGAAAACTACCACGGTAAATAC
TGTCAATGTACCAATACTGGATGTCCGGTCACCGATGGCAACGTGTGCGGTGTTGGTGGC
AAGTGTGAGAATTGTTACAACCAACCTAAGTGTAACTGCACCTCCAAGAATGGGATTCCA
TACACCTTGGATAACGTTGGTTCATGTACTTGCCATGAAAGTGAATGCATCGACCAGAGG
AGCAACAACACGATGGTTTGCAGCGGGAATGGGAATTGTTCATGCAGTAGTTGTATTTGT
GACCCTAAATACGATGGTATATATTGTCAACATTGCAACAGTCCATCGTGCAAAACCATC
ACCGCTGAATGTTCGTCCCATGAAGCTTGCGCTATATGTGTTAACGCTGCTGTGCAGAAC
CGAGAGAACGCCAACGATTTATGCCAAGTTCAATGTAAAGACGTCACCTTCCAAACTGTG
AAAGCGATTCCCGATTGTTCGGTTTGTACCGCTAATAGTGGTGTGACGTGTCCATCTGAT
TGTGCTGACGTCGATCCTTCTGTATTGACCCCAACTCCATGCTCCCAAGCTCAATCAACC
GGTCAATGCAAGGTCTCTTACAATATCGTGTGGAAGAAATCACTTCGTAATTACCTGGTG
TTGATCAAAGAATTCGACCAAGCTATTGATTGCCCGAAACCGATCAACCCGTTAGTTATC
GTCCTCCCCATCGTAGCCGGCATCGTCATCCTTGGCTTGATCGCCCTTGTAGCTTGGAAG
GTTTACCAAACTTGGAGAGATAAGAGAGAATGGAAAGTTTTCGAGAACGAGATGAAGAAA
TCGAAGTGGACGAAGGACATTAACCCGGTGTTCCAAAAACCTAAGACTCGGTTTGAGAAT
CCAGCGTACGGTGGGGATGAACAATAATGAACACACTACTTCGTATTTAAACTGATTAAA
TATGTTGCTTGAATGGCGTTAATGTATCGAGTTTTGAATTATTAATGTAAATATGCTAAA
ACGTGGCTTTGAGTGTATATTTTACTAACTATGACACCAAAACATACTTTGGTAATTAAA
GCTACCAACATTAGTATTTCAGCAATTAACTCTCTTGCTTGTTTGCTTTTACTATTTCTT
CTCGGAAACACTGCATTTTGGCAACATTTCGCAG
| PIRSF |
Integrin_bsu (IPR015812) - T[9-847] 4.2E-216 |
| PANTHER |
Integrin_bsu (IPR015812) - T[21-847] 1.6E-219 |
| PRINTS |
Integrin_bsu (IPR015812) - T[45-61] 6.4E-81 - T[115-128] 6.4E-81 - T[143-161] 6.4E-81 - T[184-203] 6.4E-81 - T[217-236] 6.4E-81 - T[250-272] 6.4E-81 - T[277-292] 6.4E-81 - T[365-389] 6.4E-81 - T[627-640] 6.4E-81 - T[775-792] 6.4E-81 - T[792-810] 6.4E-81 - T[827-837] 6.4E-81 |
| SMART |
Integrin_bsu_VWA (IPR002369) - T[47-480] 1.6E-161 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[140-393] 4.45E-71 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[140-396] 7.3E-144 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[141-395] 1.3E-101 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[398-483] 7.85E-8 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[627-640] . |
| Pfam |
Integrin_bsu_cyt_dom (IPR014836) - T[800-844] 2.4E-17 |
| SMART |
Integrin_bsu_cyt_dom (IPR014836) - T[800-846] 4.1E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB6_HUMAN | 33.698 % | 441 | 7.11E-143 |
| ITB5_HUMAN | 33.58 % | 444 | 1.01E-143 |
| ITB1_HUMAN | 34.704 % | 459 | 9.01E-150 |