- Transcript 'KH2012:KH.S1764.1.v1...'
Transcript Model
Transcript Id
KH2012:KH.S1764.1.v1.A.SL1-1
Possible name(s)
ZMAT3; ZMAT4; ZNF346
Gene model
Location
KhS1764 [3,484 / 6,981]
Amino acid sequence
Length: 277
>KH.S1764.1.v1.A.SL1-1
TLSIVMSYFITAHEEDEEDFTKDVFFTEQGPFGVSGFNMDGKEVGMHCELCNAKLETSVQ
LITHFSSKKHTAKVKQLRTSKELVLESSTGKEDDPDNMFLSDLCKVCNAELNTTDQSQAH
YMSDKHQKKVRHYFLVKVGALPEKGEEKEEVXEFERCNLCSCDFTSEIVANAHYLGKKHA
KKLKELSERQANKYFNKCFACGVVSGNARQYEIHMQSSKHAMMVEKLKSSKNGELSRRRA
ELETEIKNEAAKRARLERELAELQETEMSLAGTSNEG
Nucleotide sequence
Length: 1,094
>KH2012:KH.S1764.1.v1.A.SL1-1
ATTGCTTAGTTAGTATCTTGACCTTTAATTGAACCTTGTCCATTGTGATGTCATACTTCA
TCACTGCTCATGAAGAAGATGAGGAAGACTTCACAAAAGATGTTTTCTTCACGGAGCAAG
GACCATTCGGTGTTTCCGGTTTCAATATGGATGGAAAAGAGGTGGGAATGCATTGTGAAT
TGTGCAATGCCAAACTGGAAACATCGGTACAACTAATCACACATTTTTCAAGCAAGAAAC
ACACAGCTAAAGTAAAACAACTGAGAACATCGAAAGAGTTGGTATTGGAGTCCTCTACAG
GCAAGGAAGATGATCCAGATAATATGTTCCTTTCTGATCTTTGTAAAGTTTGTAATGCTG
AGTTAAACACTACAGATCAATCACAAGCTCATTATATGAGTGATAAGCATCAGAAAAAAG
TGAGACATTATTTTCTGGTGAAAGTTGGGGCATTACCAGAGAAAGGTGAAGAAAAGGAAG
AGGTAANTGAGTTTGAGCGATGCAATCTGTGTTCGTGTGACTTCACTTCCGAGATAGTTG
CGAATGCCCACTACCTTGGCAAGAAACATGCAAAAAAACTAAAGGAATTATCGGAGCGAC
AAGCAAACAAGTATTTTAACAAGTGCTTTGCCTGTGGTGTGGTGTCGGGCAATGCACGTC
AGTATGAGATTCATATGCAATCATCCAAGCATGCCATGATGGTGGAAAAACTAAAATCAT
CAAAAAATGGGGAACTGTCTCGTCGGCGTGCAGAGCTTGAAACAGAGATCAAAAATGAAG
CAGCAAAACGTGCCCGTCTGGAGAGAGAACTGGCAGAGTTACAAGAGACAGAAATGTCCC
TTGCTGGTACAAGCAATGAAGGTTGAGGTGTGTTCGTTTGATCACGTGATTCACCTGCGT
GATTTTTAACTCACAAACTCACGACTTGATTCAACACCAGGGAATGTTATGATGGAACAT
TAGGTTGCCAAGTTTATTAAACACGATGTGGAAAATTAAGTTCTTTTTTGTATCAGGTGT
CTTTCTTATTTTATTTAAAGTCTTTGTTTAACTTTCTATTCTGGTTTTAACAAAAATACA
TAAAATGCTTCTTT
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[37-79] 4.4E-8 - T[83-135] 3.91E-9 - T[138-186] 2.26E-10 - T[196-228] 6.35E-5 |
| SMART |
Matrin/U1-like-C_Znf_C2H2 (IPR003604) - T[43-77] 0.039 - T[99-133] 0.17 - T[157-186] 0.1 - T[191-227] 20.0 |
| SMART |
Znf_C2H2_type (IPR013087) - T[46-70] 16.0 - T[102-126] 220.0 - T[155-179] 38.0 - T[196-220] 6.0 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[48-70] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZMAT4_HUMAN | 41.905 % | 76.3 | 1.67E-16 |
