- Clone 'cicl043m20' >
- Transcript 'KH2012:KH.C4.401.v3....' >
- Transcript 'Moocci.CG.ELv1_2.S15...' >
- Transcript 'KH2012:KH.L6.4.v1.A....'
Transcript Model
Transcript Id
KH2012:KH.L6.4.v1.A.nonSL2-1
Possible name(s)
HSD17B4; HSD17B8
Gene model
Location
KhL6 [35,500 / 43,136]
Amino acid sequence
Length: 750
>KH.L6.4.v1.A.nonSL2-1
IFVSFAASLLFSVIVSGSFCSLRGNMSELRFDGKVVLITGAGAGLGKCYALEFAKRGASV
VVNDLGSTPGGVGSSAKVADQVVDEIRKLGGTAVANYDSVEFGEKLVNTALQNFGRIGAY
TMYIVINNAGILRDRSFMRMSDDEWDLVNKIHLRGSYSVTKAAWNHMKTQNYGRIIMTSS
ASGLYGNYGQSNYSAAKMGLIGFANTLKLEGKKYNISVNTIAPNALTRLTEGLIPPEVGK
DLKIEYIMPLVIYLCHESCLETGGVFEVSGGHVCKLRWERTKGAVLREEGKPMLPEDIKK
NWEQVVDFSEREVLETIGDSVMAGVSAVQRVQAGDNDLGSSHPIKPKLAKQHKFAPVTTY
HDHNKVILYALGVGASTKQKDHLKFLFEMNEDFSVLPSFGVIPAFSSMLIADVKGLEFNM
TQILHGEQYLELYKPIPTEGKLTSQATIVDVLDKGSGAAIIMDVVTKDESGEKVFYNQFV
TFVVGAGGFNGKRSSEHLKAVAKHPNRQPDSFIEQQTSNDQAALYRLSGDNNPLHIDPSF
AAMGGFKQPILHGLCSFGFSTRHVMEKYAGNDPTKIKAIKVRFAKPVIPGQTLRTEMWKE
GNRIHFQTIVAETGKPSLSGAYIDLTEAIVDEPKAVAGSLLSDALFEAAADRLTPDVIRK
VNASFQWNITKNGKVVKSWDMNLTKDAGYIKQGEASKPGCTVTVSDDDVMAIFSGSLNPQ
QAFFKGQMKVSGNIMLAQKLEVIFKSQAKL
Nucleotide sequence
Length: 2,567
>KH2012:KH.L6.4.v1.A.nonSL2-1
ATATTTGTTTCATTCGCAGCTTCGTTGCTCTTTTCTGTCATTGTTTCTGGAAGTTTTTGC
TCTCTCAGAGGAAATATGAGTGAACTAAGGTTCGATGGTAAAGTGGTCTTGATCACAGGC
GCTGGTGCAGGTCTCGGAAAATGCTATGCGCTGGAATTCGCAAAAAGAGGAGCATCTGTT
GTTGTCAACGATCTTGGTTCAACACCGGGTGGGGTAGGGAGCTCAGCAAAAGTGGCCGAC
CAAGTGGTGGACGAGATTCGAAAACTCGGTGGAACGGCTGTTGCTAATTATGATTCTGTT
GAATTTGGTGAGAAGCTTGTTAACACTGCTCTGCAAAACTTTGGCCGTATAGGTGCGTAC
ACCATGTACATTGTCATCAACAATGCAGGTATCCTCCGAGATCGCTCCTTCATGAGGATG
AGTGATGATGAGTGGGATTTAGTAAACAAGATCCACCTCCGAGGAAGTTACTCCGTCACC
AAAGCTGCTTGGAATCATATGAAGACACAGAACTACGGACGCATCATTATGACATCATCA
GCATCGGGACTTTATGGGAACTATGGACAATCCAACTACAGCGCTGCTAAAATGGGTTTA
ATCGGTTTTGCAAACACTCTTAAATTGGAAGGCAAGAAATACAACATCAGTGTTAACACT
ATTGCTCCAAATGCTCTGACCAGACTGACTGAAGGACTCATTCCACCAGAGGTTGGCAAA
GATTTGAAAATTGAGTACATCATGCCTCTAGTGATCTATCTTTGCCATGAATCATGCTTG
GAAACAGGTGGTGTGTTTGAGGTGTCTGGAGGACATGTTTGCAAACTTAGATGGGAGAGG
ACAAAGGGAGCAGTCCTTAGAGAGGAGGGAAAACCAATGCTCCCGGAGGACATTAAGAAA
AACTGGGAGCAGGTGGTGGATTTTTCAGAAAGGGAAGTTCTGGAGACGATCGGTGACTCC
GTCATGGCGGGTGTCAGCGCCGTGCAACGTGTGCAGGCCGGCGACAATGACCTTGGTTCA
TCTCATCCAATCAAACCAAAGCTTGCCAAACAGCATAAGTTTGCACCGGTCACTACTTAT
CATGATCATAACAAGGTTATTCTATATGCTCTCGGAGTGGGAGCATCTACAAAGCAGAAA
GATCATCTAAAGTTTCTCTTTGAAATGAACGAGGATTTCTCTGTTCTTCCTTCATTTGGC
GTCATCCCTGCTTTTAGTTCAATGCTCATTGCAGATGTGAAAGGACTTGAATTCAATATG
ACCCAAATACTTCATGGTGAGCAATACCTGGAACTTTACAAACCAATCCCCACAGAAGGG
AAACTTACAAGTCAAGCCACCATAGTTGATGTGTTGGATAAAGGATCTGGAGCTGCAATT
ATAATGGATGTGGTAACTAAAGACGAAAGTGGTGAAAAGGTTTTTTACAACCAGTTTGTT
ACTTTTGTGGTTGGAGCTGGTGGTTTCAATGGAAAGAGATCTTCAGAACATTTAAAGGCA
GTAGCGAAGCATCCAAACCGACAACCTGATTCCTTTATTGAGCAGCAGACAAGCAACGAT
CAAGCTGCTTTGTACAGATTAAGTGGAGACAATAATCCATTACATATTGACCCTTCCTTT
GCTGCCATGGGTGGATTTAAACAACCTATACTTCATGGTTTATGTTCGTTTGGTTTCTCC
ACTCGCCATGTTATGGAGAAATATGCAGGAAATGATCCAACCAAGATTAAAGCTATCAAG
GTTAGATTCGCAAAGCCAGTGATTCCTGGTCAAACCCTCCGTACTGAGATGTGGAAGGAA
GGAAACAGAATTCATTTCCAAACTATAGTTGCTGAAACTGGAAAACCAAGCTTATCTGGA
GCTTACATTGATCTTACTGAAGCTATTGTGGATGAGCCCAAGGCTGTAGCTGGTTCCCTG
CTAAGTGATGCATTGTTTGAGGCAGCCGCTGATCGGCTTACACCTGATGTTATAAGGAAA
GTGAATGCTTCTTTTCAATGGAATATTACTAAGAATGGAAAAGTGGTCAAGTCATGGGAC
ATGAATTTGACCAAGGATGCTGGTTATATAAAGCAAGGAGAAGCAAGCAAACCAGGATGC
ACAGTCACAGTATCAGATGATGATGTTATGGCTATATTTAGTGGCTCACTAAACCCACAA
CAGGCTTTCTTTAAAGGTCAAATGAAGGTGTCTGGTAACATTATGTTGGCACAGAAGCTA
GAAGTTATCTTCAAGTCGCAAGCGAAGCTTTGAAACAGATTTAGCTCGCAAATTTAATTA
GTCCTATGCAATTCATTGTAGTTATATATAGTTGTGAAGTAATTGATATAACATTACCAG
TTTATTATGAAGTAATTTATGTAACTTTAACAGTTTATGCTGTACTAACTAAATTTAACC
AAATTCTAATTGTTGCTGTATTATCATGCGTTGGTGTGATTTAGTATTTCAAACTACTTT
TAAATGCTATCGTGCTATCCATGTTTAATATTAATATAATTTGATGTGATAACCAATTGT
GTCTTATCGAATGCTCCAAAATAAATATATCAATACCTGTCCCCAAA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[29-308] 2.06E-56 |
| Pfam |
SDR_fam (IPR002347) - T[34-225] 3.8E-36 |
| PRINTS |
SDR_fam (IPR002347) - T[35-52] 3.1E-17 - T[120-131] 3.7E-5 - T[120-131] 3.1E-17 - T[167-183] 3.1E-17 - T[173-181] 3.7E-5 - T[193-212] 3.7E-5 - T[193-212] 3.1E-17 - T[214-231] 3.1E-17 |
| SUPERFAMILY |
HotDog_dom_sf (IPR029069) - T[352-497] 5.03E-42 - T[504-622] 1.59E-31 |
| Pfam |
MaoC_dom (IPR002539) - T[503-618] 8.1E-36 |
| Gene3D |
SCP2_sterol-bd_dom_sf (IPR036527) - T[636-750] 3.7E-32 |
| SUPERFAMILY |
SCP2_sterol-bd_dom_sf (IPR036527) - T[638-745] 1.06E-25 |
| Pfam |
SCP2_sterol-bd_dom (IPR003033) - T[651-745] 1.7E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHB8_HUMAN | 28.996 % | 95.1 | 1.03E-21 |
| DHB4_HUMAN | 53.171 % | 798 | 0 |
| SCP2D_HUMAN | 43.158 % | 82 | 3.37E-18 |