- Transcript 'KH2012:KH.C1.1061.v1...' >
- Transcript 'KH2012:KH.C2.374.v1....' >
- Transcript 'KH2012:KH.C8.163.v4....' >
- Region 'REG00000769' >
- Transcript 'KH2012:KH.L6.4.v1.A....'
Transcript Model
Transcript Id
KH2012:KH.L6.4.v1.A.ND1-1
Possible name(s)
HSD17B4; HSD17B8
Gene model
Location
KhL6 [35,493 / 43,136]
Amino acid sequence
Length: 752
>KH.L6.4.v1.A.ND1-1
HGIFVSFAASLLFSVIVSGSFCSLRGNMSELRFDGKVVLITGAGAGLGKCYALEFAKRGA
SVVVNDLGSTPGGVGSSAKVADQVVDEIRKLGGTAVANYDSVEFGEKLVNTALQNFGRIG
AYTMYIVINNAGILRDRSFMRMSDDEWDLVNKIHLRGSYSVTKAAWNHMKTQNYGRIIMT
SSASGLYGNYGQSNYSAAKMGLIGFANTLKLEGKKYNISVNTIAPNALTRLTEGLIPPEV
GKDLKIEYIMPLVIYLCHESCLETGGVFEVSGGHVCKLRWERTKGAVLREEGKPMLPEDI
KKNWEQVVDFSEREVLETIGDSVMAGVSAVQRVQAGDNDLGSSHPIKPKLAKQHKFAPVT
TYHDHNKVILYALGVGASTKQKDHLKFLFEMNEDFSVLPSFGVIPAFSSMLIADVKGLEF
NMTQILHGEQYLELYKPIPTEGKLTSQATIVDVLDKGSGAAIIMDVVTKDESGEKVFYNQ
FVTFVVGAGGFNGKRSSEHLKAVAKHPNRQPDSFIEQQTSNDQAALYRLSGDNNPLHIDP
SFAAMGGFKQPILHGLCSFGFSTRHVMEKYAGNDPTKIKAIKVRFAKPVIPGQTLRTEMW
KEGNRIHFQTIVAETGKPSLSGAYIDLTEAIVDEPKAVAGSLLSDALFEAAADRLTPDVI
RKVNASFQWNITKNGKVVKSWDMNLTKDAGYIKQGEASKPGCTVTVSDDDVMAIFSGSLN
PQQAFFKGQMKVSGNIMLAQKLEVIFKSQAKL
Nucleotide sequence
Length: 2,574
>KH2012:KH.L6.4.v1.A.ND1-1
ACACGGTATATTTGTTTCATTCGCAGCTTCGTTGCTCTTTTCTGTCATTGTTTCTGGAAG
TTTTTGCTCTCTCAGAGGAAATATGAGTGAACTAAGGTTCGATGGTAAAGTGGTCTTGAT
CACAGGCGCTGGTGCAGGTCTCGGAAAATGCTATGCGCTGGAATTCGCAAAAAGAGGAGC
ATCTGTTGTTGTCAACGATCTTGGTTCAACACCGGGTGGGGTAGGGAGCTCAGCAAAAGT
GGCCGACCAAGTGGTGGACGAGATTCGAAAACTCGGTGGAACGGCTGTTGCTAATTATGA
TTCTGTTGAATTTGGTGAGAAGCTTGTTAACACTGCTCTGCAAAACTTTGGCCGTATAGG
TGCGTACACCATGTACATTGTCATCAACAATGCAGGTATCCTCCGAGATCGCTCCTTCAT
GAGGATGAGTGATGATGAGTGGGATTTAGTAAACAAGATCCACCTCCGAGGAAGTTACTC
CGTCACCAAAGCTGCTTGGAATCATATGAAGACACAGAACTACGGACGCATCATTATGAC
ATCATCAGCATCGGGACTTTATGGGAACTATGGACAATCCAACTACAGCGCTGCTAAAAT
GGGTTTAATCGGTTTTGCAAACACTCTTAAATTGGAAGGCAAGAAATACAACATCAGTGT
TAACACTATTGCTCCAAATGCTCTGACCAGACTGACTGAAGGACTCATTCCACCAGAGGT
TGGCAAAGATTTGAAAATTGAGTACATCATGCCTCTAGTGATCTATCTTTGCCATGAATC
ATGCTTGGAAACAGGTGGTGTGTTTGAGGTGTCTGGAGGACATGTTTGCAAACTTAGATG
GGAGAGGACAAAGGGAGCAGTCCTTAGAGAGGAGGGAAAACCAATGCTCCCGGAGGACAT
TAAGAAAAACTGGGAGCAGGTGGTGGATTTTTCAGAAAGGGAAGTTCTGGAGACGATCGG
TGACTCCGTCATGGCGGGTGTCAGCGCCGTGCAACGTGTGCAGGCCGGCGACAATGACCT
TGGTTCATCTCATCCAATCAAACCAAAGCTTGCCAAACAGCATAAGTTTGCACCGGTCAC
TACTTATCATGATCATAACAAGGTTATTCTATATGCTCTCGGAGTGGGAGCATCTACAAA
GCAGAAAGATCATCTAAAGTTTCTCTTTGAAATGAACGAGGATTTCTCTGTTCTTCCTTC
ATTTGGCGTCATCCCTGCTTTTAGTTCAATGCTCATTGCAGATGTGAAAGGACTTGAATT
CAATATGACCCAAATACTTCATGGTGAGCAATACCTGGAACTTTACAAACCAATCCCCAC
AGAAGGGAAACTTACAAGTCAAGCCACCATAGTTGATGTGTTGGATAAAGGATCTGGAGC
TGCAATTATAATGGATGTGGTAACTAAAGACGAAAGTGGTGAAAAGGTTTTTTACAACCA
GTTTGTTACTTTTGTGGTTGGAGCTGGTGGTTTCAATGGAAAGAGATCTTCAGAACATTT
AAAGGCAGTAGCGAAGCATCCAAACCGACAACCTGATTCCTTTATTGAGCAGCAGACAAG
CAACGATCAAGCTGCTTTGTACAGATTAAGTGGAGACAATAATCCATTACATATTGACCC
TTCCTTTGCTGCCATGGGTGGATTTAAACAACCTATACTTCATGGTTTATGTTCGTTTGG
TTTCTCCACTCGCCATGTTATGGAGAAATATGCAGGAAATGATCCAACCAAGATTAAAGC
TATCAAGGTTAGATTCGCAAAGCCAGTGATTCCTGGTCAAACCCTCCGTACTGAGATGTG
GAAGGAAGGAAACAGAATTCATTTCCAAACTATAGTTGCTGAAACTGGAAAACCAAGCTT
ATCTGGAGCTTACATTGATCTTACTGAAGCTATTGTGGATGAGCCCAAGGCTGTAGCTGG
TTCCCTGCTAAGTGATGCATTGTTTGAGGCAGCCGCTGATCGGCTTACACCTGATGTTAT
AAGGAAAGTGAATGCTTCTTTTCAATGGAATATTACTAAGAATGGAAAAGTGGTCAAGTC
ATGGGACATGAATTTGACCAAGGATGCTGGTTATATAAAGCAAGGAGAAGCAAGCAAACC
AGGATGCACAGTCACAGTATCAGATGATGATGTTATGGCTATATTTAGTGGCTCACTAAA
CCCACAACAGGCTTTCTTTAAAGGTCAAATGAAGGTGTCTGGTAACATTATGTTGGCACA
GAAGCTAGAAGTTATCTTCAAGTCGCAAGCGAAGCTTTGAAACAGATTTAGCTCGCAAAT
TTAATTAGTCCTATGCAATTCATTGTAGTTATATATAGTTGTGAAGTAATTGATATAACA
TTACCAGTTTATTATGAAGTAATTTATGTAACTTTAACAGTTTATGCTGTACTAACTAAA
TTTAACCAAATTCTAATTGTTGCTGTATTATCATGCGTTGGTGTGATTTAGTATTTCAAA
CTACTTTTAAATGCTATCGTGCTATCCATGTTTAATATTAATATAATTTGATGTGATAAC
CAATTGTGTCTTATCGAATGCTCCAAAATAAATATATCAATACCTGTCCCCAAA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[31-310] 2.1E-56 |
| Pfam |
SDR_fam (IPR002347) - T[36-227] 3.8E-36 |
| PRINTS |
SDR_fam (IPR002347) - T[37-54] 3.2E-17 - T[122-133] 3.2E-17 - T[122-133] 3.7E-5 - T[169-185] 3.2E-17 - T[175-183] 3.7E-5 - T[195-214] 3.2E-17 - T[195-214] 3.7E-5 - T[216-233] 3.2E-17 |
| SUPERFAMILY |
HotDog_dom_sf (IPR029069) - T[354-499] 5.03E-42 - T[506-624] 1.64E-31 |
| Pfam |
MaoC_dom (IPR002539) - T[505-620] 8.1E-36 |
| Gene3D |
SCP2_sterol-bd_dom_sf (IPR036527) - T[638-752] 3.8E-32 |
| SUPERFAMILY |
SCP2_sterol-bd_dom_sf (IPR036527) - T[640-747] 1.06E-25 |
| Pfam |
SCP2_sterol-bd_dom (IPR003033) - T[653-747] 1.7E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHB8_HUMAN | 28.996 % | 95.1 | 1.02E-21 |
| DHB4_HUMAN | 53.171 % | 798 | 0 |
| SCP2D_HUMAN | 43.158 % | 82 | 3.32E-18 |