- Transcript 'KH2012:KH.C8.74.v1.A...' >
- Transcript 'KH2012:KH.C8.74.v3.A...' >
- Transcript 'KH2012:KH.C8.74.v1.A...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L5.9.v1.A....'
Transcript Model
Transcript Id
KH2012:KH.L5.9.v1.A.SL1-1
Possible name(s)
FGD6; PLEKHF1; PLEKHF2
Gene model
Location
KhL5 [115,743 / 118,662]
Amino acid sequence
Length: 259
>KH.L5.9.v1.A.SL1-1
IMVERLANTEINARRISHVESCFGSSGKPLFHPSRVLVGEGVLTKLCRKKPKARQFFLFN
DVLVYGNIVINKKRYNKQSVLSLRNVRVEEIPDNEETAAADGSDTLKNGWLIISPSKSFA
VYAQTAMEKEEWLTHMTRCIDEEKKKSGPSISVTDQFAPTWVPDSEAVVCMRCKKTRFTT
LQRKHHCRKCGLVVCNACSTKKCIIQHQSAKPLRVCDVCYQSLQNGSNTPEVTASNVPNN
KLAFGDTSYSSDSESSNEA
Nucleotide sequence
Length: 1,413
>KH2012:KH.L5.9.v1.A.SL1-1
AAACCCTGTTTCGCAATGAATATTAGGTTTGAATAATGGTTGAAAGATTGGCCAACACTG
AGATTAATGCTCGGAGAATCAGCCACGTTGAGTCTTGTTTCGGATCGTCAGGGAAACCTC
TTTTCCATCCATCGCGTGTGTTAGTTGGGGAAGGTGTTCTAACGAAACTATGCAGAAAGA
AACCAAAAGCACGACAGTTTTTCCTTTTTAATGATGTTTTGGTATACGGGAACATTGTAA
TTAATAAGAAAAGGTACAACAAACAGAGCGTGTTAAGTTTACGGAATGTCAGAGTTGAAG
AAATCCCCGATAACGAGGAAACCGCAGCAGCTGATGGTTCTGATACGTTAAAGAACGGAT
GGTTGATTATTTCACCTTCAAAGTCGTTCGCCGTTTATGCGCAAACTGCCATGGAGAAAG
AAGAATGGCTCACACACATGACTAGGTGTATAGATGAAGAGAAGAAAAAATCAGGACCAT
CTATTAGTGTTACGGACCAGTTTGCCCCAACGTGGGTCCCTGATTCAGAAGCAGTTGTGT
GCATGAGGTGTAAGAAGACAAGATTCACAACATTACAACGAAAACATCATTGTCGGAAAT
GTGGCTTGGTGGTCTGTAACGCGTGTTCGACAAAAAAATGTATCATTCAACATCAATCTG
CTAAACCATTACGAGTTTGTGACGTATGTTATCAGTCCTTACAGAATGGTAGCAATACGC
CTGAAGTTACGGCATCAAATGTTCCTAATAATAAACTTGCATTTGGGGATACTTCTTACA
GCTCGGACTCTGAATCAAGCAATGAGGCTTGACATTAGTATAGTACTATGGGGGGAGATG
GAACACCTTTAGCGCATAATATCCAAATATCCTGGTCTTGTTTTAAACAATTAACAACAG
TCTATGGGAGTCGTGAGGATATGGTTTTATAATTTTTTGAATTTTCTTTGTTTACCACCA
AATGAGACGAGAAAATGAAATGAAAAGGTGTCCCATCTCCCCCCACCCTACTATACTGAT
TGAAATTTTAAATAAAAAAGTAATTTTGATTATTCTACTCGTGGCACTATCGAATTGATT
ATTTTTATACTTGTATTATTTTGTGGTATTAACAAAACATTTATTATACAGACATGCTTT
ATATTAATATGCATTGTAATTATTGGTTGCTTTGCGTGCTTTACATTTGTATAACGTGTA
ATTTTGATTTTTAAATTGTTTGTTTCTTAAAAGTGTTTATCTTGAGATAAAATTTACAAG
TGCAGTTAATAAGAAAAAAATTTGAACTACACTATTTCAGTTGGTTGTTTAGATATTTAT
CCTTGTGTGTTGGGCAACTAGAGTTATGACATGGGTGTCTTATTGCACGGCATACATGGT
GTCTTATACACCTCATGTCCGCATACAAGTTAC
| CDD |
PH_Phafin (IPR037871) - T[8-139] 8.16904E-76 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[9-150] 2.9E-24 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[36-141] 11.486 |
| SMART |
PH_domain (IPR001849) - T[37-143] 5.3E-10 |
| Pfam |
PH_domain (IPR001849) - T[40-140] 1.4E-6 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[151-238] 4.1E-24 |
| SMART |
Znf_FYVE (IPR000306) - T[156-225] 3.3E-28 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[159-239] 1.06E-22 |
| Pfam |
Znf_FYVE (IPR000306) - T[160-224] 2.1E-17 |
| ProSiteProfiles |
Znf_FYVE-rel (IPR017455) - T[164-224] 12.428 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FGD6_HUMAN | 36.019 % | 131 | 1.17E-34 |
| PKHF2_HUMAN | 59.111 % | 286 | 3.88E-98 |
| PKHF1_HUMAN | 50 % | 236 | 7.3E-78 |