Aniseed - Transcript Card

Transcript 'KH2012:KH.L57.26.v1....'

Transcript Model

Transcript Id

KH2012:KH.L57.26.v1.A.SL2-1

Possible name(s)

PFDN4

Gene model

KH2012:KH.L57.26

Location

KhL57 [167,085 / 168,139]

Sequences

Amino acid sequence

Length: 133

>KH.L57.26.v1.A.SL2-1
LLVLITMSSDKEEVQVTLEDQKKINLFAKKNGNLNEIETELEEIKKALQNIEDAGDDLLL
LEDEDSEAIPYQLGEVFIQHNLEETQGLLEKEKDKYEQRMKQLKEEAGEIESMMKELKVQ
LYAKFGDNINLEA

Nucleotide sequence

Length: 811

>KH2012:KH.L57.26.v1.A.SL2-1
ACTATTAGTATTAATAACAATGTCATCCGATAAAGAAGAAGTCCAAGTCACTTTGGAAGA
TCAAAAGAAGATTAATTTGTTCGCGAAGAAGAACGGGAATCTAAACGAGATTGAAACGGA
GCTTGAAGAGATCAAAAAAGCTCTTCAGAACATCGAGGATGCGGGAGATGATCTTCTACT
TCTGGAGGACGAGGACTCAGAGGCAATTCCGTACCAACTTGGAGAAGTCTTCATCCAGCA
TAACTTGGAGGAGACGCAAGGACTTTTAGAGAAAGAAAAAGATAAATATGAGCAGAGGAT
GAAACAGTTAAAAGAGGAGGCGGGCGAGATTGAAAGCATGATGAAGGAATTGAAAGTTCA
ACTTTACGCAAAGTTTGGGGATAATATTAACCTGGAAGCTTAATTTAAGAACTGCCATAC
TCTGCAGACTGGAATAGTAGGAAATAAAAAGTTTCAGCTTTGGTTTGTTGATACATTTGT
ACCTTGAGGTTGTTTACATTTGCGTATATAATTACTATTAATTAATATTCTGGCTTTGCA
CAGAAACACTAATATTATAAAATGGTAGTTCAAGTTATTAAACAAAATTTAGTAAGTAAG
TTATGCTTCTTTCCACTTTACTTGTATACCATGTATTATTATACTGTGTGTTGCATGCAT
GATTTTGAACCAATTAATGCTTATATACGCAAAATTGTTATAAATAATTACTTTTCATAT
TCAGTGCATGAAGTTTAGTGAAAGCCCTGAATGTGTGTATGTGTGTTTCAATATTAACTA
CGTGATACATTTTTAGTTGTTGTATTTTCAG

InterProScan

PIRSF	PFDN4 (IPR016661) - T[5-133] 7.9E-36
PANTHER	PFDN4 (IPR016661) - T[6-133] 1.6E-43
Pfam	PFD_beta-like (IPR002777) - T[21-127] 9.1E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PFD4_HUMAN	50.82 %	118	2.71E-35