- Transcript 'KH2012:KH.L41.3.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L41.3.v1.A.SL1-1
Possible name(s)
PRDM10; PRDM15; PRDM4
Gene model
Location
KhL41 [274,907 / 283,476]
Amino acid sequence
Length: 788
>KH.L41.3.v1.A.SL1-1
FESNVIDSRVCITEFKMDGGNLVIVEEDFSEDEELEVFAIKDKKFQSKARSTLPDILSVV
QTETYSCGVVAKTRIRARTQFGPLDAPLVSEQVSSFVLKPGPTRLNEVNTADDKTDLYYD
TREENSCNWMCLVRVAQNSDEQNLVAQLVKQDVYFTTIRKIEAKEELKVWYAPKYAKFLG
KPLLQPNINQHEDNDARSLRGRKLRKSIRASFNDPIRDEEEVDVRSVPPKKRNWGRTSRQ
FVKSSGVLNHIESVRNISQESRDIQPTPISDPASAPPDVLDTAIELIMEVEKTKVKNRHV
CYYCGKSFGRKHTLKLHQSSHFPPSFLCHTCGRPFKRKDKLHEHYKRMHTPGVVAKVRKI
KQTGKTFQPQISPTDYQRFLYKCMHCMVGFQRRGMLVNHLLKRHPEVNVNAVPELRLPIM
KKTVAYVCPYCSKSYQSITKRKDHILKHHPGQQVPPGLREVRKANCAGNIIDPAIKKTPT
VTTQPVNCPYCPSQYSGRAKMVNHLTVKHPDKVGDYVGKKKKPFNKKVDKVDTIPTYQHN
DNEFNNQPDADIHNVNSYLEHDILAQVDSTMAPENQYIVGRQIQPLQHMPRLPAPPPQPE
YLPSTINVTMPTDYDNQYITNTVDDVTSNVTTDILSEFENAVGTEIHGNTNENYRVMNSQ
LPHHPAQPHNTRQLPMTYQRGRKQLLLQAMNEERHRDNMNRQTRNYHNQLMNPRDIQTDQ
SHSSMSIQVDDITMDINRTNTTNYLHNNHLENQHSTTLTQLSTPTDGWICPSYVIIPSDK
QKPETLEH
Nucleotide sequence
Length: 2,919
>KH2012:KH.L41.3.v1.A.SL1-1
TTTTGTTACCACTTTTAGTTTTATTGGTTGGATTTAATTTGAAAGCAATGTCATAGACTC
GAGAGTGTGCATCACTGAATTTAAGATGGATGGAGGAAACCTTGTCATCGTGGAGGAAGA
TTTCTCGGAGGACGAAGAACTTGAAGTTTTTGCGATTAAAGATAAAAAGTTCCAAAGCAA
AGCGAGATCAACCCTGCCTGATATCCTTAGTGTTGTCCAGACAGAGACCTACAGTTGTGG
AGTTGTAGCAAAGACACGAATACGAGCGCGAACGCAGTTTGGGCCGCTTGACGCACCTTT
GGTATCCGAACAAGTTTCATCGTTTGTGTTGAAGCCAGGGCCAACAAGGTTAAATGAAGT
CAATACAGCTGATGATAAAACGGATCTTTATTATGATACAAGGGAGGAGAATTCTTGTAA
CTGGATGTGCCTGGTTCGTGTTGCTCAAAACTCGGATGAGCAAAACTTGGTGGCCCAACT
AGTGAAGCAAGATGTTTATTTCACAACTATTCGTAAAATAGAAGCAAAGGAAGAACTCAA
GGTGTGGTACGCCCCTAAATACGCCAAGTTCCTCGGCAAGCCTCTCCTGCAACCAAACAT
CAACCAACATGAAGATAACGATGCAAGAAGTTTAAGAGGTCGTAAACTTCGCAAGTCGAT
CCGCGCATCTTTCAACGATCCCATAAGAGATGAAGAAGAAGTGGATGTAAGGAGCGTTCC
TCCCAAGAAGAGGAACTGGGGGAGGACAAGTCGGCAGTTTGTTAAGAGCTCAGGTGTATT
AAACCACATTGAATCTGTGAGGAACATATCACAAGAAAGCAGAGATATTCAACCGACTCC
CATCAGCGATCCAGCCAGCGCCCCCCCTGACGTGCTCGACACTGCCATTGAGTTGATAAT
GGAGGTGGAAAAGACGAAAGTGAAAAACCGCCATGTTTGTTATTACTGCGGAAAGTCGTT
TGGTCGCAAACATACATTGAAACTCCACCAATCCTCCCATTTCCCTCCTTCCTTCCTCTG
CCATACATGTGGTCGACCATTCAAAAGAAAGGATAAGTTGCATGAACATTACAAACGCAT
GCATACTCCTGGGGTGGTTGCGAAAGTTAGAAAGATAAAGCAAACTGGCAAAACTTTTCA
ACCGCAGATCTCGCCCACCGACTACCAGAGGTTTCTTTACAAATGCATGCATTGTATGGT
CGGCTTCCAACGCAGAGGAATGCTGGTCAACCATCTGCTGAAACGACATCCAGAAGTCAA
TGTTAATGCTGTTCCAGAGTTACGCCTTCCAATTATGAAGAAAACAGTTGCTTATGTTTG
TCCTTATTGTTCCAAATCCTACCAATCCATAACCAAGAGGAAGGATCACATACTTAAGCA
TCACCCCGGCCAACAAGTACCACCAGGTCTAAGGGAGGTTAGGAAGGCAAACTGTGCCGG
GAATATAATAGACCCTGCAATAAAGAAGACGCCCACTGTTACAACTCAACCAGTCAATTG
CCCGTATTGCCCCTCACAATATTCCGGCAGGGCGAAGATGGTGAACCATCTTACTGTGAA
GCATCCTGATAAAGTGGGCGATTATGTCGGCAAGAAAAAGAAACCTTTCAACAAGAAAGT
GGATAAAGTTGACACGATACCGACGTACCAACATAATGATAATGAGTTCAACAACCAACC
TGATGCGGATATACATAACGTCAACTCATACCTTGAGCATGATATACTTGCGCAAGTTGA
CAGCACGATGGCGCCAGAGAATCAATATATTGTTGGTCGACAAATACAACCGCTCCAGCA
CATGCCACGCCTCCCTGCCCCGCCCCCCCAACCTGAGTACCTTCCTTCCACCATCAATGT
TACCATGCCTACTGATTATGACAACCAATACATCACAAACACTGTTGATGATGTCACAAG
CAACGTGACAACCGATATATTGTCTGAGTTCGAGAATGCAGTTGGAACCGAAATTCATGG
AAACACGAACGAAAACTATCGAGTGATGAACAGCCAGTTGCCCCACCACCCCGCACAGCC
ACACAACACGCGTCAACTACCAATGACTTACCAACGCGGACGGAAACAACTTTTACTGCA
AGCCATGAATGAGGAGCGACATAGAGATAATATGAACAGACAAACAAGGAACTACCATAA
CCAATTGATGAACCCACGTGATATTCAAACCGACCAATCACACAGCAGTATGAGCATTCA
AGTTGATGACATCACAATGGACATTAACAGAACAAACACAACCAATTATTTACACAACAA
TCACCTTGAAAATCAGCATTCCACAACTTTAACGCAGCTCTCTACTCCCACCGATGGCTG
GATTTGTCCTTCTTACGTCATTATACCCTCAGATAAACAAAAACCAGAAACATTAGAACA
CTAGCTGGTGCTATTCTATATAGAGAAATTTAAATGAATGAGAATTTTTTATCCGTTCGG
TTACAATAACAAAAATCTTCCAAAAGCGATAAACAGCAACAGTATATATATATGGGACCT
TTACGTTTATGCCTCTTGTTCTTATATAAGGGCAGACTTGATTCAGATACCAAACCAAAG
AAATTTGTTGCAAACTTGGTTTAAAGTGTCTCGCAACTATCAGAATGATGTTCCAGTAAA
CTTAAGTATTTATCGTGATTCTGGAACAGCCTTAGATGAGATCCGTACTTAAAAGCCCAA
TCCTATTTAACTTGATTCTAATGTTTTACCCTTGTAATGCTATGCATATTGTGTGCGTTT
GTGCTTAACTAAGCAATACTTGCTGCTTCTATATATATTTATACAATGTTTAAACGTGTT
TTGACTACAGAACTTTATTTATTGTTTTGTCATTGACTCATTATTGCGTAACAATCACAT
CCGTGATGTCACATTTGATAAAACAGTTCTAGAATGAAA
| ProSiteProfiles |
SET_dom (IPR001214) - T[33-172] 10.752 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[297-337] 2.72E-6 - T[322-368] 7.41E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[299-321] 10.637 - T[326-350] 11.51 - T[426-454] 8.871 |
| SMART |
Znf_C2H2_type (IPR013087) - T[299-321] 0.27 - T[326-349] 0.42 - T[381-404] 0.25 - T[426-448] 0.046 - T[486-509] 1.6 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[328-349] . - T[383-404] . - T[428-449] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRD10_HUMAN | 49.533 % | 215 | 2.75E-58 |
| PRD15_HUMAN | 41.135 % | 98.2 | 7.77E-21 |
